Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 AC060834.1-201ENST00000443027 2032 ntBASIC12.78□□□□□ -0.36
AP1S3Q96PC3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 MIR4785-201ENST00000585005 73 ntBASIC12.78□□□□□ -0.36
AP1S3Q96PC3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 AP000525.1-201ENST00000608286 694 ntBASIC12.78□□□□□ -0.36
AP1S3Q96PC3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 FP325330.2-201ENST00000624219 5630 ntBASIC12.78□□□□□ -0.36
AP1S3Q96PC3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 C8orf49-201ENST00000525043 1968 ntBASIC12.78□□□□□ -0.36
AP1S3Q96PC3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP1S3Q96PC3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 AL158047.1-201ENST00000445918 881 ntBASIC12.77□□□□□ -0.37
AP1S3Q96PC3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 AC026691.1-201ENST00000602502 2017 ntBASIC12.77□□□□□ -0.37
AP1S3Q96PC3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms