Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SMIM17P0DL12 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM17P0DL12 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AL391807.1-203ENST00000604392 2365 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 CYP2T1P-202ENST00000641596 2535 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AC007950.2-201ENST00000615045 2347 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SNORA78-201ENST00000459373 127 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 RASA4DP-201ENST00000460726 1199 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 ZNF444P1-201ENST00000559497 298 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 GCSHP2-201ENST00000560971 527 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 FAM87A-204ENST00000613235 858 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AL031432.5-201ENST00000641059 760 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AC105917.1-201ENST00000506637 2539 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 AL513523.2-202ENST00000427283 2040 ntBASIC12.59□□□□□ -0.39
SMIM17P0DL12 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM17P0DL12 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM17P0DL12 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SMIM17P0DL12 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.58□□□□□ -0.39
SMIM17P0DL12 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.58□□□□□ -0.39
SMIM17P0DL12 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SMIM17P0DL12 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.58□□□□□ -0.39
SMIM17P0DL12 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SMIM17P0DL12 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
SMIM17P0DL12 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SMIM17P0DL12 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SMIM17P0DL12 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM17P0DL12 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms