Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC006058.4-201ENST00000624016 1670 ntBASIC13.15□□□□□ -0.3
ERVFC1-1P60608 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC124947.2-201ENST00000547118 1133 ntBASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC026471.5-201ENST00000615068 467 ntBASIC13.15□□□□□ -0.3
ERVFC1-1P60608 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 AC112497.1-201ENST00000624824 639 ntBASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.15□□□□□ -0.3
ERVFC1-1P60608 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ERVFC1-1P60608 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
ERVFC1-1P60608 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 ECEL1P3-201ENST00000427961 737 ntBASIC13.14□□□□□ -0.31
ERVFC1-1P60608 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 CA15P1-201ENST00000481698 905 ntBASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 MIR4674-201ENST00000582457 87 ntBASIC13.14□□□□□ -0.31
ERVFC1-1P60608 AF186192.3-201ENST00000583427 947 ntBASIC13.14□□□□□ -0.31
ERVFC1-1P60608 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 AC073195.1-201ENST00000607241 877 ntBASIC13.14□□□□□ -0.31
ERVFC1-1P60608 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 AC096733.2-201ENST00000609937 1394 ntBASIC13.14□□□□□ -0.31
ERVFC1-1P60608 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.14□□□□□ -0.31
ERVFC1-1P60608 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms