Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
AIF1P55008 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
AIF1P55008 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
AIF1P55008 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.33■□□□□ 0.36
AIF1P55008 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.33■□□□□ 0.36
AIF1P55008 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.33■□□□□ 0.36
AIF1P55008 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.33■□□□□ 0.36
AIF1P55008 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
AIF1P55008 AC021097.1-201ENST00000607902 574 ntBASIC17.33■□□□□ 0.36
AIF1P55008 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.33■□□□□ 0.36
AIF1P55008 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
AIF1P55008 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.33■□□□□ 0.36
AIF1P55008 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AIF1P55008 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
AIF1P55008 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.32■□□□□ 0.36
AIF1P55008 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 AL671710.1-201ENST00000610245 2349 ntBASIC17.32■□□□□ 0.36
AIF1P55008 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.32■□□□□ 0.36
AIF1P55008 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AIF1P55008 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
AIF1P55008 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
AIF1P55008 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.32■□□□□ 0.36
AIF1P55008 MED15P5-201ENST00000423150 992 ntBASIC17.32■□□□□ 0.36
AIF1P55008 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.32■□□□□ 0.36
AIF1P55008 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.32■□□□□ 0.36
AIF1P55008 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.32■□□□□ 0.36
AIF1P55008 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.32■□□□□ 0.36
AIF1P55008 AC109635.5-201ENST00000533593 962 ntBASIC17.32■□□□□ 0.36
AIF1P55008 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
AIF1P55008 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.32■□□□□ 0.36
AIF1P55008 AL031055.1-201ENST00000606362 631 ntBASIC17.32■□□□□ 0.36
AIF1P55008 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
AIF1P55008 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AIF1P55008 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
AIF1P55008 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AIF1P55008 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.31■□□□□ 0.36
AIF1P55008 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 AC007967.2-201ENST00000432613 625 ntBASIC17.31■□□□□ 0.36
AIF1P55008 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.31■□□□□ 0.36
AIF1P55008 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.31■□□□□ 0.36
AIF1P55008 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.31■□□□□ 0.36
AIF1P55008 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.31■□□□□ 0.36
AIF1P55008 AC140113.2-201ENST00000604370 208 ntBASIC17.31■□□□□ 0.36
AIF1P55008 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 AC004877.2-201ENST00000623941 599 ntBASIC17.31■□□□□ 0.36
AIF1P55008 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AIF1P55008 AL031731.1-201ENST00000642131 2094 ntBASIC17.31■□□□□ 0.36
AIF1P55008 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.31■□□□□ 0.36
AIF1P55008 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.31■□□□□ 0.36
AIF1P55008 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AIF1P55008 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.3■□□□□ 0.36
AIF1P55008 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms