Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT6AP02538 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT6AP02538 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT6AP02538 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT6AP02538 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
KRT6AP02538 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 HCG4P8-203ENST00000443049 980 ntBASIC16.37■□□□□ 0.21
KRT6AP02538 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
KRT6AP02538 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT6AP02538 AC064862.7-201ENST00000604520 867 ntBASIC16.37■□□□□ 0.21
KRT6AP02538 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.37■□□□□ 0.21
KRT6AP02538 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
KRT6AP02538 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
KRT6AP02538 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT6AP02538 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.36■□□□□ 0.21
KRT6AP02538 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.36■□□□□ 0.21
KRT6AP02538 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.36■□□□□ 0.21
KRT6AP02538 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 AL139424.1-201ENST00000607572 797 ntBASIC16.36■□□□□ 0.21
KRT6AP02538 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 AL355877.3-201ENST00000622820 899 ntBASIC16.36■□□□□ 0.21
KRT6AP02538 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
KRT6AP02538 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.36■□□□□ 0.21
KRT6AP02538 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
KRT6AP02538 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.36■□□□□ 0.21
KRT6AP02538 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
KRT6AP02538 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 CICP6-201ENST00000457191 2729 ntBASIC16.35■□□□□ 0.21
KRT6AP02538 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
KRT6AP02538 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT6AP02538 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT6AP02538 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 HLA-J-202ENST00000469281 1241 ntBASIC16.35■□□□□ 0.21
KRT6AP02538 KRT18P31-201ENST00000506277 1292 ntBASIC16.35■□□□□ 0.21
KRT6AP02538 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT6AP02538 AC139887.3-201ENST00000568585 713 ntBASIC16.35■□□□□ 0.21
KRT6AP02538 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT6AP02538 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT6AP02538 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT6AP02538 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT6AP02538 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms