Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD3DP04234 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD3DP04234 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.36□□□□□ -0.11
CD3DP04234 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD3DP04234 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD3DP04234 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.36□□□□□ -0.11
CD3DP04234 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD3DP04234 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD3DP04234 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD3DP04234 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD3DP04234 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD3DP04234 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 GCSHP5-201ENST00000443090 522 ntBASIC14.35□□□□□ -0.11
CD3DP04234 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.35□□□□□ -0.11
CD3DP04234 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 GPR32P1-201ENST00000601788 811 ntBASIC14.35□□□□□ -0.11
CD3DP04234 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.35□□□□□ -0.11
CD3DP04234 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD3DP04234 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.35□□□□□ -0.11
CD3DP04234 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD3DP04234 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.34□□□□□ -0.11
CD3DP04234 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.34□□□□□ -0.11
CD3DP04234 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD3DP04234 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.34□□□□□ -0.11
CD3DP04234 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.34□□□□□ -0.11
CD3DP04234 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.34□□□□□ -0.11
CD3DP04234 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD3DP04234 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.34□□□□□ -0.11
CD3DP04234 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.34□□□□□ -0.11
CD3DP04234 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD3DP04234 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.34□□□□□ -0.11
CD3DP04234 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms