Protein–RNA interactions for Protein: O43251

RBFOX2, RNA binding protein fox-1 homolog 2, humanhuman

Known RBP eCLIP

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2O43251 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.461e-12■■□□□ 13.1
RBFOX2O43251 RPL34-206ENST00000504231 629 ntTSL 1 (best)5.7□□□□□ -1.51e-12■■□□□ 13.1
RBFOX2O43251 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.721e-12■■□□□ 13.1
RBFOX2O43251 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.6■□□□□ 0.098e-7■■□□□ 13.1
RBFOX2O43251 SLC29A2-204ENST00000541567 2272 ntTSL 1 (best)15.37■□□□□ 0.058e-7■■□□□ 13.1
RBFOX2O43251 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.098e-7■■□□□ 13.1
RBFOX2O43251 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.168e-7■■□□□ 13.1
RBFOX2O43251 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.28e-7■■□□□ 13.1
RBFOX2O43251 SLC29A2-203ENST00000540386 2474 ntTSL 1 (best)13.27□□□□□ -0.298e-7■■□□□ 13.1
RBFOX2O43251 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.14□□□□□ -0.318e-7■■□□□ 13.1
RBFOX2O43251 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.912e-9■■□□□ 13.1
RBFOX2O43251 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -12e-9■■□□□ 13.1
RBFOX2O43251 CTNND1-235ENST00000533189 498 ntTSL 37.73□□□□□ -1.172e-9■■□□□ 13.1
RBFOX2O43251 PLCB1-213ENST00000626114 598 ntTSL 57.89□□□□□ -1.158e-9■■□□□ 13.1
RBFOX2O43251 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.77■□□□□ 0.287e-7■■□□□ 13.1
RBFOX2O43251 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 07e-7■■□□□ 13.1
RBFOX2O43251 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.04■□□□□ -07e-7■■□□□ 13.1
RBFOX2O43251 ZSWIM8-205ENST00000433366 5773 ntTSL 514.31□□□□□ -0.127e-7■■□□□ 13.1
RBFOX2O43251 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.76□□□□□ -0.217e-7■■□□□ 13.1
RBFOX2O43251 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.447e-7■■□□□ 13.1
RBFOX2O43251 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.649e-7■■□□□ 13.1
RBFOX2O43251 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC10.35□□□□□ -0.759e-7■■□□□ 13.1
RBFOX2O43251 TGFBR1-207ENST00000549766 1678 ntTSL 520.13■□□□□ 0.812e-8■■□□□ 13.1
RBFOX2O43251 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.452e-8■■□□□ 13.1
RBFOX2O43251 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.47■□□□□ 0.232e-8■■□□□ 13.1
RBFOX2O43251 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC8.87□□□□□ -0.992e-8■■□□□ 13.1
RBFOX2O43251 TGFBR1-204ENST00000547314 533 ntTSL 43.37□□□□□ -1.872e-8■■□□□ 13.1
RBFOX2O43251 TGFBR1-210ENST00000552573 526 ntTSL 40.83□□□□□ -2.282e-8■■□□□ 13.1
RBFOX2O43251 WDR13-205ENST00000472440 430 ntTSL 216.13■□□□□ 0.179e-7■■□□□ 13.1
RBFOX2O43251 WDR13-212ENST00000498631 859 ntTSL 215.49■□□□□ 0.079e-7■■□□□ 13.1
RBFOX2O43251 WDR13-208ENST00000486125 936 ntTSL 215.27■□□□□ 0.049e-7■■□□□ 13.1
RBFOX2O43251 WDR13-209ENST00000492715 2612 ntTSL 514.07□□□□□ -0.169e-7■■□□□ 13.1
RBFOX2O43251 WDR13-204ENST00000470124 437 ntTSL 312.1□□□□□ -0.479e-7■■□□□ 13.1
RBFOX2O43251 PLCB1-227ENST00000636825 3020 ntTSL 56.44□□□□□ -1.385e-7■■□□□ 13.1
RBFOX2O43251 PLCB1-221ENST00000635830 3237 ntTSL 56.27□□□□□ -1.415e-7■■□□□ 13.1
RBFOX2O43251 PLCB1-226ENST00000636784 100 ntTSL 52.92□□□□□ -1.945e-7■■□□□ 13.1
RBFOX2O43251 FBXO31-203ENST00000563956 548 ntTSL 318.44■□□□□ 0.543e-6■■□□□ 13
RBFOX2O43251 FBXO31-206ENST00000569412 431 ntTSL 53.39□□□□□ -1.873e-6■■□□□ 13
RBFOX2O43251 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.22□□□□□ -0.455e-7■■□□□ 13
RBFOX2O43251 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.58□□□□□ -0.41e-6■■□□□ 13
RBFOX2O43251 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.448e-7■■□□□ 13
RBFOX2O43251 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.312e-6■■□□□ 13
RBFOX2O43251 RBM39-212ENST00000429968 2149 ntTSL 211.44□□□□□ -0.583e-6■■□□□ 13
RBFOX2O43251 RBM39-216ENST00000444878 2124 ntTSL 211.29□□□□□ -0.63e-6■■□□□ 13
RBFOX2O43251 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC10.72□□□□□ -0.693e-6■■□□□ 13
RBFOX2O43251 RBM39-245ENST00000639702 5914 ntTSL 510.38□□□□□ -0.753e-6■■□□□ 13
RBFOX2O43251 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.753e-6■■□□□ 13
RBFOX2O43251 RBM39-206ENST00000403542 2883 ntTSL 29.98□□□□□ -0.813e-6■■□□□ 13
RBFOX2O43251 RBM39-202ENST00000338163 2792 ntTSL 29.97□□□□□ -0.813e-6■■□□□ 13
RBFOX2O43251 RBM39-223ENST00000463004 4580 ntTSL 59.95□□□□□ -0.823e-6■■□□□ 13
RBFOX2O43251 RBM39-236ENST00000490484 871 ntTSL 57.89□□□□□ -1.153e-6■■□□□ 13
RBFOX2O43251 RBM39-239ENST00000494274 704 ntTSL 35.55□□□□□ -1.523e-6■■□□□ 13
RBFOX2O43251 RBM39-237ENST00000492779 2316 ntTSL 25.45□□□□□ -1.543e-6■■□□□ 13
RBFOX2O43251 RBM39-244ENST00000615771 686 ntTSL 54.76□□□□□ -1.653e-6■■□□□ 13
RBFOX2O43251 RBM39-217ENST00000448303 1008 ntTSL 53.82□□□□□ -1.83e-6■■□□□ 13
RBFOX2O43251 RBM39-229ENST00000475651 555 ntTSL 53.45□□□□□ -1.863e-6■■□□□ 13
RBFOX2O43251 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.963e-6■■□□□ 13
RBFOX2O43251 RBM39-221ENST00000461283 2415 ntTSL 52.61□□□□□ -1.993e-6■■□□□ 13
RBFOX2O43251 FADS3-205ENST00000526294 550 ntTSL 313.9□□□□□ -0.184e-7■■□□□ 13
RBFOX2O43251 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.191e-9■■□□□ 13
RBFOX2O43251 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.427e-8■■□□□ 13
RBFOX2O43251 TOP3B-213ENST00000457179 3061 ntTSL 511.35□□□□□ -0.597e-8■■□□□ 13
RBFOX2O43251 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.77e-8■■□□□ 13
RBFOX2O43251 TOP3B-210ENST00000444502 4163 ntTSL 28.64□□□□□ -1.037e-8■■□□□ 13
RBFOX2O43251 EME2-202ENST00000561903 4586 ntTSL 211.95□□□□□ -0.54e-7■■□□□ 13
RBFOX2O43251 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.42e-6■■□□□ 13
RBFOX2O43251 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.272e-6■■□□□ 13
RBFOX2O43251 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.262e-6■■□□□ 13
RBFOX2O43251 PEG3-203ENST00000594389 411 ntTSL 316.41■□□□□ 0.222e-6■■□□□ 13
RBFOX2O43251 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.16□□□□□ -0.142e-6■■□□□ 13
RBFOX2O43251 PEG3-204ENST00000594706 583 ntTSL 313.98□□□□□ -0.172e-6■■□□□ 13
RBFOX2O43251 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)13.06□□□□□ -0.322e-6■■□□□ 13
RBFOX2O43251 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC10.09□□□□□ -0.792e-6■■□□□ 13
RBFOX2O43251 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.192e-6■■□□□ 13
RBFOX2O43251 PEG3-205ENST00000596261 570 ntTSL 46.62□□□□□ -1.352e-6■■□□□ 13
RBFOX2O43251 SRRT-201ENST00000423692 727 ntTSL 511.15□□□□□ -0.621e-8■■□□□ 13
RBFOX2O43251 MCEE-203ENST00000462609 633 ntTSL 36.05□□□□□ -1.445e-12■■□□□ 13
RBFOX2O43251 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.22■□□□□ 0.351e-6■■□□□ 13
RBFOX2O43251 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.11□□□□□ -0.471e-6■■□□□ 13
RBFOX2O43251 ERGIC1-209ENST00000520642 539 ntTSL 411.88□□□□□ -0.511e-6■■□□□ 13
RBFOX2O43251 ERGIC1-207ENST00000520326 647 ntTSL 511.21□□□□□ -0.611e-6■■□□□ 13
RBFOX2O43251 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.453e-9■■□□□ 13
RBFOX2O43251 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.313e-9■■□□□ 13
RBFOX2O43251 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.643e-9■■□□□ 13
RBFOX2O43251 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.813e-9■■□□□ 13
RBFOX2O43251 SRSF11-209ENST00000463877 617 ntTSL 221.98■■□□□ 1.116e-12■■□□□ 13
RBFOX2O43251 SRSF11-204ENST00000395136 1408 ntTSL 1 (best)20.51■□□□□ 0.876e-12■■□□□ 13
RBFOX2O43251 SRSF11-211ENST00000473950 796 ntTSL 518.66■□□□□ 0.586e-12■■□□□ 13
RBFOX2O43251 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.546e-12■■□□□ 13
RBFOX2O43251 SRSF11-212ENST00000475204 760 ntTSL 517.75■□□□□ 0.436e-12■■□□□ 13
RBFOX2O43251 SRSF11-210ENST00000469170 668 ntTSL 215.56■□□□□ 0.086e-12■■□□□ 13
RBFOX2O43251 SRSF11-215ENST00000486667 662 ntTSL 58.43□□□□□ -1.066e-12■■□□□ 13
RBFOX2O43251 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.386e-12■■□□□ 13
RBFOX2O43251 PLCG1-212ENST00000492148 597 ntTSL 210.43□□□□□ -0.744e-7■■□□□ 13
RBFOX2O43251 GAK-210ENST00000507991 328 ntTSL 57.98□□□□□ -1.132e-6■■□□□ 13
RBFOX2O43251 RARA-205ENST00000420042 1052 ntTSL 311.45□□□□□ -0.581e-7■■□□□ 13
RBFOX2O43251 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.446e-8■■□□□ 13
RBFOX2O43251 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.21e-7■■□□□ 13
RBFOX2O43251 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.464e-8■■□□□ 13
RBFOX2O43251 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.034e-8■■□□□ 13
Retrieved 100 of 22,255 protein–RNA pairs in 179.1 ms