Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 AP000842.3-202ENST00000569238 1080 ntBASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPOQ8N3V7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 GK-202ENST00000378941 458 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 AP001350.2-201ENST00000625104 1094 ntBASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPOQ8N3V7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 AC012317.2-201ENST00000623305 2251 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 LYSMD4-203ENST00000378904 2122 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 RNU1-129P-201ENST00000384064 167 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 U1.21-201ENST00000580816 167 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 AC027307.2-201ENST00000591252 911 ntBASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.1■□□□□ 0.33
SYNPOQ8N3V7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms