Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 AC139887.3-201ENST00000568585 713 ntBASIC15.64■□□□□ 0.09
VRK2Q86Y07 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.64■□□□□ 0.09
VRK2Q86Y07 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VRK2Q86Y07 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.64■□□□□ 0.09
VRK2Q86Y07 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 AC006449.5-201ENST00000610658 2098 ntBASIC15.63■□□□□ 0.09
VRK2Q86Y07 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 ALOX12P2-203ENST00000570921 1945 ntBASIC15.63■□□□□ 0.09
VRK2Q86Y07 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 AC092364.2-201ENST00000596710 2692 ntBASIC15.63■□□□□ 0.09
VRK2Q86Y07 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.63■□□□□ 0.09
VRK2Q86Y07 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VRK2Q86Y07 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 AF238378.1-201ENST00000526806 358 ntBASIC15.62■□□□□ 0.09
VRK2Q86Y07 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.62■□□□□ 0.09
VRK2Q86Y07 AC004706.3-202ENST00000621574 984 ntBASIC15.62■□□□□ 0.09
VRK2Q86Y07 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VRK2Q86Y07 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms