Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 AL021920.2-201ENST00000624828 1351 ntBASIC17.13■□□□□ 0.33
CDH16O75309 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 TSPY26P-202ENST00000565928 3884 ntBASIC17.13■□□□□ 0.33
CDH16O75309 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 RNF152P1-201ENST00000397754 604 ntBASIC17.12■□□□□ 0.33
CDH16O75309 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.12■□□□□ 0.33
CDH16O75309 RN7SL606P-201ENST00000472779 293 ntBASIC17.12■□□□□ 0.33
CDH16O75309 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH16O75309 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 AL590326.2-201ENST00000625139 305 ntBASIC17.12■□□□□ 0.33
CDH16O75309 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH16O75309 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH16O75309 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH16O75309 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH16O75309 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDH16O75309 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH16O75309 AK4P3-201ENST00000418260 669 ntBASIC17.11■□□□□ 0.33
CDH16O75309 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CDH16O75309 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 HOMER2P1-201ENST00000455653 964 ntBASIC17.11■□□□□ 0.33
CDH16O75309 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH16O75309 AL049597.2-201ENST00000565575 961 ntBASIC17.11■□□□□ 0.33
CDH16O75309 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 AC139887.4-201ENST00000607877 719 ntBASIC17.11■□□□□ 0.33
CDH16O75309 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH16O75309 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH16O75309 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 AL513477.1-201ENST00000602865 2407 ntBASIC17.11■□□□□ 0.33
CDH16O75309 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH16O75309 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH16O75309 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
CDH16O75309 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH16O75309 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH16O75309 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH16O75309 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH16O75309 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDH16O75309 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms