Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.7■□□□□ 0.42
OPHN1O60890 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
OPHN1O60890 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
OPHN1O60890 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
OPHN1O60890 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.69■□□□□ 0.42
OPHN1O60890 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
OPHN1O60890 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.69■□□□□ 0.42
OPHN1O60890 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.69■□□□□ 0.42
OPHN1O60890 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.69■□□□□ 0.42
OPHN1O60890 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 LINC02084-201ENST00000606069 1096 ntBASIC17.69■□□□□ 0.42
OPHN1O60890 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.69■□□□□ 0.42
OPHN1O60890 AC008735.5-201ENST00000623544 497 ntBASIC17.69■□□□□ 0.42
OPHN1O60890 AL139288.1-201ENST00000623748 933 ntBASIC17.69■□□□□ 0.42
OPHN1O60890 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
OPHN1O60890 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
OPHN1O60890 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
OPHN1O60890 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
OPHN1O60890 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
OPHN1O60890 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.68■□□□□ 0.42
OPHN1O60890 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
OPHN1O60890 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.68■□□□□ 0.42
OPHN1O60890 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.68■□□□□ 0.42
OPHN1O60890 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
OPHN1O60890 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.68■□□□□ 0.42
OPHN1O60890 AC124947.2-201ENST00000547118 1133 ntBASIC17.68■□□□□ 0.42
OPHN1O60890 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.68■□□□□ 0.42
OPHN1O60890 AC012640.2-201ENST00000561606 901 ntBASIC17.68■□□□□ 0.42
OPHN1O60890 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.68■□□□□ 0.42
OPHN1O60890 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.68■□□□□ 0.42
OPHN1O60890 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.68■□□□□ 0.42
OPHN1O60890 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
OPHN1O60890 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OPHN1O60890 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.67■□□□□ 0.42
OPHN1O60890 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.67■□□□□ 0.42
OPHN1O60890 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
OPHN1O60890 NKILA-202ENST00000614771 2598 ntBASIC17.67■□□□□ 0.42
OPHN1O60890 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
OPHN1O60890 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.67■□□□□ 0.42
OPHN1O60890 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.67■□□□□ 0.42
OPHN1O60890 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
OPHN1O60890 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 AC105339.3-201ENST00000560043 636 ntBASIC17.67■□□□□ 0.42
OPHN1O60890 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
OPHN1O60890 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.67■□□□□ 0.42
OPHN1O60890 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
OPHN1O60890 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
OPHN1O60890 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
OPHN1O60890 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
OPHN1O60890 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms