Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 BNIP3P18-201ENST00000593976 575 ntBASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 AC114341.1-201ENST00000618070 349 ntBASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 GPR89P-201ENST00000407924 1495 ntBASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 TP73-AS1-210ENST00000637775 1455 ntBASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 CLEC4GP1-201ENST00000596555 870 ntBASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 AC011467.2-201ENST00000598425 242 ntBASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 CYP2T1P-202ENST00000641596 2535 ntBASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 TUBB8P12-201ENST00000308911 1335 ntBASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 TUBB7P-202ENST00000428444 1305 ntBASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 TUBB8P7-204ENST00000567960 1332 ntBASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.1□□□□□ -0.15
LIN7CQ9NUP9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AL049757.1-201ENST00000616842 1596 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms