Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 AC112497.1-201ENST00000624824 639 ntBASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 AL031985.4-201ENST00000642138 673 ntBASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.34□□□□□ -0.43
CHCHD1Q96BP2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CHCHD1Q96BP2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHCHD1Q96BP2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
CHCHD1Q96BP2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 AC026748.1-201ENST00000624349 3251 ntBASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 CA15P1-201ENST00000481698 905 ntBASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 AC113404.2-201ENST00000507884 177 ntBASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 AC006486.2-201ENST00000624246 2199 ntBASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CHCHD1Q96BP2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 SNX18-202ENST00000343017 3140 ntBASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 KRT18P29-201ENST00000397031 1267 ntBASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 AC026396.1-201ENST00000419388 421 ntBASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHCHD1Q96BP2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms