Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB3IL1Q8TBN0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB3IL1Q8TBN0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 STARP1-201ENST00000397973 869 ntBASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 AL356309.3-201ENST00000624132 1934 ntBASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 AL365203.3-201ENST00000609742 2057 ntBASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3IL1Q8TBN0 AL645728.1-201ENST00000366221 2101 ntBASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 AL135999.2-201ENST00000622438 1686 ntBASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 AL662844.4-201ENST00000606367 2838 ntBASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 AC006538.1-201ENST00000567905 1585 ntBASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 HLA-J-202ENST00000469281 1241 ntBASIC16.91■□□□□ 0.3
RAB3IL1Q8TBN0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms