Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.4□□□□□ -0.1
CD3DP04234 CYP2D8P-201ENST00000433633 1490 ntBASIC14.4□□□□□ -0.1
CD3DP04234 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CD3DP04234 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.4□□□□□ -0.1
CD3DP04234 AC007967.3-201ENST00000434308 558 ntBASIC14.4□□□□□ -0.1
CD3DP04234 AL158047.1-201ENST00000445918 881 ntBASIC14.4□□□□□ -0.1
CD3DP04234 FAM201B-201ENST00000458407 597 ntBASIC14.4□□□□□ -0.1
CD3DP04234 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.4□□□□□ -0.1
CD3DP04234 AC111152.3-201ENST00000569699 673 ntBASIC14.4□□□□□ -0.1
CD3DP04234 MIR4785-201ENST00000585005 73 ntBASIC14.4□□□□□ -0.1
CD3DP04234 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 Z99916.2-201ENST00000604037 246 ntBASIC14.4□□□□□ -0.1
CD3DP04234 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
CD3DP04234 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.4□□□□□ -0.1
CD3DP04234 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.4□□□□□ -0.1
CD3DP04234 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CD3DP04234 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.4□□□□□ -0.1
CD3DP04234 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.4□□□□□ -0.1
CD3DP04234 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 AL136379.1-201ENST00000623471 2642 ntBASIC14.4□□□□□ -0.1
CD3DP04234 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD3DP04234 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.4□□□□□ -0.1
CD3DP04234 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.11
CD3DP04234 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
CD3DP04234 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CD3DP04234 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.39□□□□□ -0.11
CD3DP04234 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 AL049757.1-201ENST00000616842 1596 ntBASIC14.39□□□□□ -0.11
CD3DP04234 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD3DP04234 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD3DP04234 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 AC010491.1-201ENST00000563101 2797 ntBASIC14.39□□□□□ -0.11
CD3DP04234 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
CD3DP04234 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.39□□□□□ -0.11
CD3DP04234 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.39□□□□□ -0.11
CD3DP04234 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.39□□□□□ -0.11
CD3DP04234 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CD3DP04234 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.39□□□□□ -0.11
CD3DP04234 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.39□□□□□ -0.11
CD3DP04234 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.39□□□□□ -0.11
CD3DP04234 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD3DP04234 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.38□□□□□ -0.11
CD3DP04234 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
CD3DP04234 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD3DP04234 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
CD3DP04234 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD3DP04234 NORAD-201ENST00000565493 5339 ntBASIC14.38□□□□□ -0.11
CD3DP04234 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms