Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND3P03897 AL391005.1-201ENST00000623953 2435 ntBASIC17.3■□□□□ 0.36
MT-ND3P03897 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-ND3P03897 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND3P03897 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND3P03897 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND3P03897 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND3P03897 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 AC007967.3-201ENST00000434308 558 ntBASIC17.3■□□□□ 0.36
MT-ND3P03897 FDX1P1-201ENST00000449115 551 ntBASIC17.3■□□□□ 0.36
MT-ND3P03897 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND3P03897 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.3■□□□□ 0.36
MT-ND3P03897 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND3P03897 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-ND3P03897 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-ND3P03897 AC138894.3-201ENST00000603787 634 ntBASIC17.3■□□□□ 0.36
MT-ND3P03897 CYP2T1P-202ENST00000641596 2535 ntBASIC17.3■□□□□ 0.36
MT-ND3P03897 AL662844.4-201ENST00000606367 2838 ntBASIC17.3■□□□□ 0.36
MT-ND3P03897 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND3P03897 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND3P03897 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MT-ND3P03897 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND3P03897 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.3■□□□□ 0.36
MT-ND3P03897 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND3P03897 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-ND3P03897 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 PCDHB17P-201ENST00000539533 2393 ntBASIC17.29■□□□□ 0.36
MT-ND3P03897 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-ND3P03897 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MT-ND3P03897 IGHV3-47-201ENST00000425060 335 ntBASIC17.29■□□□□ 0.36
MT-ND3P03897 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.29■□□□□ 0.36
MT-ND3P03897 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MT-ND3P03897 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-ND3P03897 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-ND3P03897 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MT-ND3P03897 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-ND3P03897 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND3P03897 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 PCDHA1-201ENST00000378133 2726 ntBASIC17.28■□□□□ 0.36
MT-ND3P03897 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MT-ND3P03897 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MT-ND3P03897 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-ND3P03897 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-ND3P03897 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-ND3P03897 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 KRT16P4-201ENST00000453883 522 ntBASIC17.28■□□□□ 0.36
MT-ND3P03897 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-ND3P03897 EMBP1-201ENST00000458200 901 ntBASIC17.28■□□□□ 0.36
MT-ND3P03897 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-ND3P03897 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND3P03897 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 404.7 ms