Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 RARRES2P9-201ENST00000565168 469 ntBASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 LINC02560-201ENST00000596379 459 ntBASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 AP3S2-216ENST00000617003 1561 ntBASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC10Q9NYD6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 LINC02012-201ENST00000608206 1725 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AC015922.1-201ENST00000421102 1152 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AC092580.3-201ENST00000430932 139 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AC124947.2-201ENST00000547118 1133 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AC008761.3-201ENST00000624803 892 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AF228730.6-201ENST00000641497 218 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AC084121.3-201ENST00000641716 218 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 AC105233.6-201ENST00000642093 218 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 TUBB8P12-201ENST00000308911 1335 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 TUBB7P-202ENST00000428444 1305 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 TUBB8P7-204ENST00000567960 1332 ntBASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC10Q9NYD6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 MIR661-201ENST00000384842 89 ntBASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 AC241585.1-201ENST00000433527 519 ntBASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC10Q9NYD6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC10Q9NYD6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms