Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.46■□□□□ 0.39
CSPG4P5Q96PW8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.46■□□□□ 0.39
CSPG4P5Q96PW8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG4P5Q96PW8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG4P5Q96PW8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CSPG4P5Q96PW8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.46■□□□□ 0.38
CSPG4P5Q96PW8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 AC108073.2-201ENST00000464002 357 ntBASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 AC116407.3-201ENST00000623905 1129 ntBASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG4P5Q96PW8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AC098831.1-202ENST00000438821 336 ntBASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AL662844.1-201ENST00000546340 181 ntBASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AP001005.1-201ENST00000571755 1248 ntBASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 OR7E47P-204ENST00000575924 449 ntBASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 MIR4492-201ENST00000581627 80 ntBASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 AL118508.1-201ENST00000613502 2345 ntBASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSPG4P5Q96PW8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 AC124067.4-201ENST00000519691 2379 ntBASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 AC091167.2-201ENST00000579581 588 ntBASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 AC004790.2-201ENST00000623588 572 ntBASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms