Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC246785.2-201ENST00000432512 513 ntBASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 AC074051.2-201ENST00000565115 352 ntBASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 TPM4P1-201ENST00000436100 807 ntBASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 AL121772.3-201ENST00000610840 674 ntBASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RAB40AQ8WXH6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 KRT17P6-201ENST00000453795 1220 ntBASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.93□□□□□ -0.02
RAB40AQ8WXH6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms