Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-5P52952 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-5P52952 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-5P52952 MIR939-201ENST00000401314 82 ntBASIC14.43□□□□□ -0.1
NKX2-5P52952 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 AC091305.1-201ENST00000479476 895 ntBASIC14.43□□□□□ -0.1
NKX2-5P52952 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.43□□□□□ -0.1
NKX2-5P52952 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
NKX2-5P52952 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.43□□□□□ -0.1
NKX2-5P52952 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-5P52952 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-5P52952 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-5P52952 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-5P52952 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 AC232323.1-201ENST00000540724 2099 ntBASIC14.42□□□□□ -0.1
NKX2-5P52952 REXO1L5P-201ENST00000622260 2098 ntBASIC14.42□□□□□ -0.1
NKX2-5P52952 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 AC124947.2-201ENST00000547118 1133 ntBASIC14.42□□□□□ -0.1
NKX2-5P52952 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX2-5P52952 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-5P52952 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-5P52952 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-5P52952 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX2-5P52952 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX2-5P52952 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-5P52952 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX2-5P52952 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-5P52952 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.41□□□□□ -0.1
NKX2-5P52952 AL645728.1-201ENST00000366221 2101 ntBASIC14.41□□□□□ -0.1
NKX2-5P52952 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-5P52952 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-5P52952 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-5P52952 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms