Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 AC096733.2-201ENST00000609937 1394 ntBASIC14.25□□□□□ -0.13
CXCL3P19876 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CXCL3P19876 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 KRT18P29-201ENST00000397031 1267 ntBASIC14.25□□□□□ -0.13
CXCL3P19876 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 AC133681.1-201ENST00000465482 601 ntBASIC14.25□□□□□ -0.13
CXCL3P19876 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 KRT18P6-201ENST00000555540 1265 ntBASIC14.25□□□□□ -0.13
CXCL3P19876 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.25□□□□□ -0.13
CXCL3P19876 MIR6786-201ENST00000616843 113 ntBASIC14.25□□□□□ -0.13
CXCL3P19876 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CXCL3P19876 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.25□□□□□ -0.13
CXCL3P19876 NORAD-201ENST00000565493 5339 ntBASIC14.25□□□□□ -0.13
CXCL3P19876 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.25□□□□□ -0.13
CXCL3P19876 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL3P19876 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL3P19876 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CXCL3P19876 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.24□□□□□ -0.13
CXCL3P19876 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.24□□□□□ -0.13
CXCL3P19876 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.24□□□□□ -0.13
CXCL3P19876 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 AC124016.1-201ENST00000609552 612 ntBASIC14.24□□□□□ -0.13
CXCL3P19876 AC110285.5-201ENST00000611501 352 ntBASIC14.24□□□□□ -0.13
CXCL3P19876 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CXCL3P19876 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.24□□□□□ -0.13
CXCL3P19876 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.24□□□□□ -0.13
CXCL3P19876 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CXCL3P19876 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CXCL3P19876 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 AC006486.2-201ENST00000624246 2199 ntBASIC14.23□□□□□ -0.13
CXCL3P19876 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL3P19876 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CXCL3P19876 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL3P19876 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms