Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH16O75309 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH16O75309 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH16O75309 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH16O75309 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDH16O75309 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH16O75309 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH16O75309 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH16O75309 KRT18P21-201ENST00000515767 1272 ntBASIC17.17■□□□□ 0.34
CDH16O75309 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CDH16O75309 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 RNF126P1-202ENST00000569893 925 ntBASIC17.17■□□□□ 0.34
CDH16O75309 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH16O75309 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH16O75309 AL353801.3-201ENST00000609898 542 ntBASIC17.17■□□□□ 0.34
CDH16O75309 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH16O75309 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH16O75309 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDH16O75309 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH16O75309 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH16O75309 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CDH16O75309 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH16O75309 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH16O75309 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH16O75309 GUSBP12-201ENST00000513727 720 ntBASIC17.16■□□□□ 0.34
CDH16O75309 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH16O75309 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH16O75309 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH16O75309 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH16O75309 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDH16O75309 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH16O75309 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 VENTXP5-201ENST00000523979 775 ntBASIC17.15■□□□□ 0.34
CDH16O75309 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 RN7SL850P-201ENST00000579959 291 ntBASIC17.15■□□□□ 0.34
CDH16O75309 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms