Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LDB2O43679 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LDB2O43679 HLA-A-201ENST00000376802 1334 ntBASIC16.94■□□□□ 0.3
LDB2O43679 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.94■□□□□ 0.3
LDB2O43679 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LDB2O43679 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 HLA-A-202ENST00000376806 1854 ntBASIC16.93■□□□□ 0.3
LDB2O43679 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.93■□□□□ 0.3
LDB2O43679 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LDB2O43679 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LDB2O43679 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LDB2O43679 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.93■□□□□ 0.3
LDB2O43679 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 AC108073.2-201ENST00000464002 357 ntBASIC16.93■□□□□ 0.3
LDB2O43679 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.93■□□□□ 0.3
LDB2O43679 MIR4492-201ENST00000581627 80 ntBASIC16.93■□□□□ 0.3
LDB2O43679 MPDU1-223ENST00000582151 728 ntBASIC16.93■□□□□ 0.3
LDB2O43679 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
LDB2O43679 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.93■□□□□ 0.3
LDB2O43679 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.93■□□□□ 0.3
LDB2O43679 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.93■□□□□ 0.3
LDB2O43679 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.93■□□□□ 0.3
LDB2O43679 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LDB2O43679 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LDB2O43679 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 AC098831.1-202ENST00000438821 336 ntBASIC16.92■□□□□ 0.3
LDB2O43679 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.92■□□□□ 0.3
LDB2O43679 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.92■□□□□ 0.3
LDB2O43679 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LDB2O43679 AC004790.2-201ENST00000623588 572 ntBASIC16.92■□□□□ 0.3
LDB2O43679 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LDB2O43679 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 UBALD1-205ENST00000590891 2641 ntBASIC16.92■□□□□ 0.3
LDB2O43679 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB2O43679 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LDB2O43679 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB2O43679 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.92■□□□□ 0.3
LDB2O43679 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LDB2O43679 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 SLC22A20-204ENST00000530038 1673 ntBASIC16.91■□□□□ 0.3
LDB2O43679 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LDB2O43679 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.91■□□□□ 0.3
LDB2O43679 IGHV3-22-201ENST00000520721 359 ntBASIC16.91■□□□□ 0.3
LDB2O43679 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms