Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HS3ST3A1Q9Y663 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
HS3ST3A1Q9Y663 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HS3ST3A1Q9Y663 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
HS3ST3A1Q9Y663 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.83■■□□□ 1.4
HS3ST3A1Q9Y663 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HS3ST3A1Q9Y663 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.82■■□□□ 1.4
HS3ST3A1Q9Y663 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HS3ST3A1Q9Y663 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HS3ST3A1Q9Y663 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.79■■□□□ 1.4
HS3ST3A1Q9Y663 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
HS3ST3A1Q9Y663 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HS3ST3A1Q9Y663 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HS3ST3A1Q9Y663 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.79■■□□□ 1.4
HS3ST3A1Q9Y663 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
HS3ST3A1Q9Y663 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
HS3ST3A1Q9Y663 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HS3ST3A1Q9Y663 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.76■■□□□ 1.39
HS3ST3A1Q9Y663 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HS3ST3A1Q9Y663 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HS3ST3A1Q9Y663 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.75■■□□□ 1.39
HS3ST3A1Q9Y663 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HS3ST3A1Q9Y663 GUSBP5-201ENST00000418136 578 ntBASIC23.74■■□□□ 1.39
HS3ST3A1Q9Y663 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.74■■□□□ 1.39
HS3ST3A1Q9Y663 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HS3ST3A1Q9Y663 KRT18P24-201ENST00000344739 1156 ntBASIC23.73■■□□□ 1.39
HS3ST3A1Q9Y663 Z92544.1-202ENST00000571933 1220 ntBASIC23.73■■□□□ 1.39
HS3ST3A1Q9Y663 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HS3ST3A1Q9Y663 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
HS3ST3A1Q9Y663 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
HS3ST3A1Q9Y663 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HS3ST3A1Q9Y663 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
HS3ST3A1Q9Y663 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
HS3ST3A1Q9Y663 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.7■■□□□ 1.38
HS3ST3A1Q9Y663 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.38
HS3ST3A1Q9Y663 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.7■■□□□ 1.38
HS3ST3A1Q9Y663 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HS3ST3A1Q9Y663 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HS3ST3A1Q9Y663 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HS3ST3A1Q9Y663 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
HS3ST3A1Q9Y663 AC239859.2-201ENST00000444165 318 ntBASIC23.69■■□□□ 1.38
HS3ST3A1Q9Y663 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.69■■□□□ 1.38
HS3ST3A1Q9Y663 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
HS3ST3A1Q9Y663 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HS3ST3A1Q9Y663 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HS3ST3A1Q9Y663 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.68■■□□□ 1.38
HS3ST3A1Q9Y663 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HS3ST3A1Q9Y663 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HS3ST3A1Q9Y663 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HS3ST3A1Q9Y663 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms