Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
FAM49AQ9H0Q0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.67■■□□□ 1.86
FAM49AQ9H0Q0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
FAM49AQ9H0Q0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
FAM49AQ9H0Q0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
FAM49AQ9H0Q0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
FAM49AQ9H0Q0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.66■■□□□ 1.86
FAM49AQ9H0Q0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.66■■□□□ 1.86
FAM49AQ9H0Q0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.65■■□□□ 1.86
FAM49AQ9H0Q0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
FAM49AQ9H0Q0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
FAM49AQ9H0Q0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FAM49AQ9H0Q0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
FAM49AQ9H0Q0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.64■■□□□ 1.86
FAM49AQ9H0Q0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.63■■□□□ 1.85
FAM49AQ9H0Q0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FAM49AQ9H0Q0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.63■■□□□ 1.85
FAM49AQ9H0Q0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
FAM49AQ9H0Q0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
FAM49AQ9H0Q0 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.62■■□□□ 1.85
FAM49AQ9H0Q0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
FAM49AQ9H0Q0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FAM49AQ9H0Q0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
FAM49AQ9H0Q0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FAM49AQ9H0Q0 KRT18P10-201ENST00000388836 1287 ntBASIC26.61■■□□□ 1.85
FAM49AQ9H0Q0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
FAM49AQ9H0Q0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
FAM49AQ9H0Q0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FAM49AQ9H0Q0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
FAM49AQ9H0Q0 GUSBP5-201ENST00000418136 578 ntBASIC26.59■■□□□ 1.85
FAM49AQ9H0Q0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.59■■□□□ 1.85
FAM49AQ9H0Q0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.59■■□□□ 1.85
FAM49AQ9H0Q0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.58■■□□□ 1.85
FAM49AQ9H0Q0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
FAM49AQ9H0Q0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FAM49AQ9H0Q0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FAM49AQ9H0Q0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
FAM49AQ9H0Q0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.55■■□□□ 1.84
FAM49AQ9H0Q0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
FAM49AQ9H0Q0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 AC239859.2-201ENST00000444165 318 ntBASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
FAM49AQ9H0Q0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
FAM49AQ9H0Q0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.53■■□□□ 1.84
FAM49AQ9H0Q0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
FAM49AQ9H0Q0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
FAM49AQ9H0Q0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
FAM49AQ9H0Q0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
FAM49AQ9H0Q0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
FAM49AQ9H0Q0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.5■■□□□ 1.83
FAM49AQ9H0Q0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.5■■□□□ 1.83
FAM49AQ9H0Q0 AC131212.1-201ENST00000613771 668 ntBASIC26.5■■□□□ 1.83
FAM49AQ9H0Q0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
FAM49AQ9H0Q0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FAM49AQ9H0Q0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
FAM49AQ9H0Q0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
FAM49AQ9H0Q0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
FAM49AQ9H0Q0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
FAM49AQ9H0Q0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.49■■□□□ 1.83
FAM49AQ9H0Q0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FAM49AQ9H0Q0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FAM49AQ9H0Q0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FAM49AQ9H0Q0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
FAM49AQ9H0Q0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.48■■□□□ 1.83
FAM49AQ9H0Q0 AC022616.5-201ENST00000518796 181 ntBASIC26.48■■□□□ 1.83
FAM49AQ9H0Q0 THA1P-201ENST00000590384 1145 ntBASIC26.48■■□□□ 1.83
FAM49AQ9H0Q0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
FAM49AQ9H0Q0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
FAM49AQ9H0Q0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
FAM49AQ9H0Q0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
FAM49AQ9H0Q0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
FAM49AQ9H0Q0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms