Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLPBQ9H078 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLPBQ9H078 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
CLPBQ9H078 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLPBQ9H078 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLPBQ9H078 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CLPBQ9H078 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLPBQ9H078 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CLPBQ9H078 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.11■■□□□ 1.45
CLPBQ9H078 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.11■■□□□ 1.45
CLPBQ9H078 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.11■■□□□ 1.45
CLPBQ9H078 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLPBQ9H078 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.11■■□□□ 1.45
CLPBQ9H078 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CLPBQ9H078 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
CLPBQ9H078 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLPBQ9H078 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.09■■□□□ 1.45
CLPBQ9H078 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLPBQ9H078 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLPBQ9H078 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CLPBQ9H078 AC145676.1-201ENST00000514988 2004 ntBASIC24.08■■□□□ 1.45
CLPBQ9H078 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.08■■□□□ 1.45
CLPBQ9H078 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
CLPBQ9H078 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CLPBQ9H078 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLPBQ9H078 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CLPBQ9H078 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLPBQ9H078 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.07■■□□□ 1.44
CLPBQ9H078 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.07■■□□□ 1.44
CLPBQ9H078 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLPBQ9H078 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CLPBQ9H078 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLPBQ9H078 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CLPBQ9H078 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLPBQ9H078 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CLPBQ9H078 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CLPBQ9H078 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLPBQ9H078 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.05■■□□□ 1.44
CLPBQ9H078 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLPBQ9H078 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.05■■□□□ 1.44
CLPBQ9H078 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLPBQ9H078 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.05■■□□□ 1.44
CLPBQ9H078 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLPBQ9H078 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLPBQ9H078 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.04■■□□□ 1.44
CLPBQ9H078 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLPBQ9H078 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.04■■□□□ 1.44
CLPBQ9H078 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
CLPBQ9H078 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLPBQ9H078 MIR6765-201ENST00000614092 87 ntBASIC24.03■■□□□ 1.44
CLPBQ9H078 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLPBQ9H078 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLPBQ9H078 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLPBQ9H078 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLPBQ9H078 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.02■■□□□ 1.44
CLPBQ9H078 DUSP8P4-201ENST00000399538 1761 ntBASIC24.02■■□□□ 1.44
CLPBQ9H078 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLPBQ9H078 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.02■■□□□ 1.44
CLPBQ9H078 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLPBQ9H078 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLPBQ9H078 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLPBQ9H078 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.01■■□□□ 1.43
CLPBQ9H078 BHLHE23-202ENST00000612929 1109 ntBASIC24.01■■□□□ 1.43
CLPBQ9H078 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.01■■□□□ 1.43
CLPBQ9H078 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLPBQ9H078 AC010980.1-201ENST00000587192 1142 ntBASIC24■■□□□ 1.43
CLPBQ9H078 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CLPBQ9H078 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CLPBQ9H078 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24■■□□□ 1.43
CLPBQ9H078 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLPBQ9H078 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLPBQ9H078 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLPBQ9H078 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLPBQ9H078 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.99■■□□□ 1.43
CLPBQ9H078 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLPBQ9H078 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.99■■□□□ 1.43
CLPBQ9H078 AC018755.3-202ENST00000596210 929 ntBASIC23.99■■□□□ 1.43
CLPBQ9H078 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLPBQ9H078 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.99■■□□□ 1.43
CLPBQ9H078 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLPBQ9H078 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLPBQ9H078 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.98■■□□□ 1.43
CLPBQ9H078 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLPBQ9H078 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLPBQ9H078 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLPBQ9H078 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLPBQ9H078 ERN1-208ENST00000606895 2068 ntBASIC23.98■■□□□ 1.43
CLPBQ9H078 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.98■■□□□ 1.43
CLPBQ9H078 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLPBQ9H078 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLPBQ9H078 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
CLPBQ9H078 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLPBQ9H078 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.97■■□□□ 1.43
CLPBQ9H078 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.97■■□□□ 1.43
CLPBQ9H078 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.96■■□□□ 1.43
CLPBQ9H078 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLPBQ9H078 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLPBQ9H078 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CLPBQ9H078 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.96■■□□□ 1.43
CLPBQ9H078 AC010501.1-201ENST00000606270 1962 ntBASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms