Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM40Q8WWA1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TMEM40Q8WWA1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.47■■□□□ 1.83
TMEM40Q8WWA1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.47■■□□□ 1.83
TMEM40Q8WWA1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.47■■□□□ 1.83
TMEM40Q8WWA1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.47■■□□□ 1.83
TMEM40Q8WWA1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.47■■□□□ 1.83
TMEM40Q8WWA1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMEM40Q8WWA1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.46■■□□□ 1.83
TMEM40Q8WWA1 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.46■■□□□ 1.83
TMEM40Q8WWA1 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.46■■□□□ 1.83
TMEM40Q8WWA1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TMEM40Q8WWA1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMEM40Q8WWA1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 GUSBP5-201ENST00000418136 578 ntBASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM40Q8WWA1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM40Q8WWA1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM40Q8WWA1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.43■■□□□ 1.82
TMEM40Q8WWA1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM40Q8WWA1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM40Q8WWA1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM40Q8WWA1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM40Q8WWA1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM40Q8WWA1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM40Q8WWA1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM40Q8WWA1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
TMEM40Q8WWA1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.4■■□□□ 1.82
TMEM40Q8WWA1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TMEM40Q8WWA1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM40Q8WWA1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM40Q8WWA1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM40Q8WWA1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.39■■□□□ 1.82
TMEM40Q8WWA1 KRT18P10-201ENST00000388836 1287 ntBASIC26.39■■□□□ 1.82
TMEM40Q8WWA1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM40Q8WWA1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.39■■□□□ 1.82
TMEM40Q8WWA1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM40Q8WWA1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.38■■□□□ 1.81
TMEM40Q8WWA1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM40Q8WWA1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM40Q8WWA1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM40Q8WWA1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
TMEM40Q8WWA1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.36■■□□□ 1.81
TMEM40Q8WWA1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM40Q8WWA1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM40Q8WWA1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM40Q8WWA1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.35■■□□□ 1.81
TMEM40Q8WWA1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM40Q8WWA1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.35■■□□□ 1.81
TMEM40Q8WWA1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM40Q8WWA1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.34■■□□□ 1.81
TMEM40Q8WWA1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM40Q8WWA1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
TMEM40Q8WWA1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
TMEM40Q8WWA1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM40Q8WWA1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM40Q8WWA1 AC239859.2-201ENST00000444165 318 ntBASIC26.33■■□□□ 1.81
TMEM40Q8WWA1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM40Q8WWA1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM40Q8WWA1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
TMEM40Q8WWA1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.33■■□□□ 1.81
TMEM40Q8WWA1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM40Q8WWA1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.32■■□□□ 1.8
TMEM40Q8WWA1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM40Q8WWA1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TMEM40Q8WWA1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.31■■□□□ 1.8
TMEM40Q8WWA1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.31■■□□□ 1.8
TMEM40Q8WWA1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.31■■□□□ 1.8
TMEM40Q8WWA1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.31■■□□□ 1.8
TMEM40Q8WWA1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMEM40Q8WWA1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM40Q8WWA1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM40Q8WWA1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM40Q8WWA1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TMEM40Q8WWA1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
TMEM40Q8WWA1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 AC022616.5-201ENST00000518796 181 ntBASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TMEM40Q8WWA1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TMEM40Q8WWA1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TMEM40Q8WWA1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TMEM40Q8WWA1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms