Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 AC019171.1-201ENST00000601251 1056 ntBASIC26.27■■□□□ 1.8
RNF169Q8NCN4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF169Q8NCN4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF169Q8NCN4 LONRF2P2-201ENST00000439212 571 ntBASIC26.26■■□□□ 1.79
RNF169Q8NCN4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF169Q8NCN4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RNF169Q8NCN4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.25■■□□□ 1.79
RNF169Q8NCN4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RNF169Q8NCN4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
RNF169Q8NCN4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.24■■□□□ 1.79
RNF169Q8NCN4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF169Q8NCN4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF169Q8NCN4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF169Q8NCN4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF169Q8NCN4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF169Q8NCN4 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.23■■□□□ 1.79
RNF169Q8NCN4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF169Q8NCN4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.23■■□□□ 1.79
RNF169Q8NCN4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF169Q8NCN4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF169Q8NCN4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF169Q8NCN4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.22■■□□□ 1.79
RNF169Q8NCN4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF169Q8NCN4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RNF169Q8NCN4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF169Q8NCN4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.21■■□□□ 1.79
RNF169Q8NCN4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
RNF169Q8NCN4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RNF169Q8NCN4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
RNF169Q8NCN4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF169Q8NCN4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF169Q8NCN4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.19■■□□□ 1.78
RNF169Q8NCN4 GUSBP5-201ENST00000418136 578 ntBASIC26.19■■□□□ 1.78
RNF169Q8NCN4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF169Q8NCN4 AC131212.1-201ENST00000613771 668 ntBASIC26.18■■□□□ 1.78
RNF169Q8NCN4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF169Q8NCN4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
RNF169Q8NCN4 AC239859.2-201ENST00000444165 318 ntBASIC26.17■■□□□ 1.78
RNF169Q8NCN4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF169Q8NCN4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF169Q8NCN4 KRT18P10-201ENST00000388836 1287 ntBASIC26.16■■□□□ 1.78
RNF169Q8NCN4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RNF169Q8NCN4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RNF169Q8NCN4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.16■■□□□ 1.78
RNF169Q8NCN4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF169Q8NCN4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF169Q8NCN4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF169Q8NCN4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.15■■□□□ 1.78
RNF169Q8NCN4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF169Q8NCN4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
RNF169Q8NCN4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF169Q8NCN4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF169Q8NCN4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.13■■□□□ 1.77
RNF169Q8NCN4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.13■■□□□ 1.77
RNF169Q8NCN4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF169Q8NCN4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF169Q8NCN4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF169Q8NCN4 THA1P-201ENST00000590384 1145 ntBASIC26.12■■□□□ 1.77
RNF169Q8NCN4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.12■■□□□ 1.77
RNF169Q8NCN4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RNF169Q8NCN4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF169Q8NCN4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RNF169Q8NCN4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.11■■□□□ 1.77
RNF169Q8NCN4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RNF169Q8NCN4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF169Q8NCN4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RNF169Q8NCN4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.09■■□□□ 1.77
RNF169Q8NCN4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF169Q8NCN4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
RNF169Q8NCN4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF169Q8NCN4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.08■■□□□ 1.76
RNF169Q8NCN4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF169Q8NCN4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF169Q8NCN4 AL356441.2-201ENST00000443009 864 ntBASIC26.06■■□□□ 1.76
RNF169Q8NCN4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.06■■□□□ 1.76
RNF169Q8NCN4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF169Q8NCN4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms