Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH20Q8N6Y1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH20Q8N6Y1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDH20Q8N6Y1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH20Q8N6Y1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH20Q8N6Y1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PCDH20Q8N6Y1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDH20Q8N6Y1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDH20Q8N6Y1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDH20Q8N6Y1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH20Q8N6Y1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDH20Q8N6Y1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH20Q8N6Y1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDH20Q8N6Y1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH20Q8N6Y1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDH20Q8N6Y1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
PCDH20Q8N6Y1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PCDH20Q8N6Y1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH20Q8N6Y1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH20Q8N6Y1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH20Q8N6Y1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH20Q8N6Y1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 KRT18P10-201ENST00000388836 1287 ntBASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH20Q8N6Y1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH20Q8N6Y1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 AC139795.1-202ENST00000500444 432 ntBASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 AC074183.2-201ENST00000623112 922 ntBASIC24.45■■□□□ 1.5
PCDH20Q8N6Y1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH20Q8N6Y1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH20Q8N6Y1 BHLHE23-202ENST00000612929 1109 ntBASIC24.44■■□□□ 1.5
PCDH20Q8N6Y1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH20Q8N6Y1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH20Q8N6Y1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDH20Q8N6Y1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH20Q8N6Y1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH20Q8N6Y1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH20Q8N6Y1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDH20Q8N6Y1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH20Q8N6Y1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDH20Q8N6Y1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDH20Q8N6Y1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH20Q8N6Y1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH20Q8N6Y1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH20Q8N6Y1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH20Q8N6Y1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
PCDH20Q8N6Y1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH20Q8N6Y1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH20Q8N6Y1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PCDH20Q8N6Y1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 RPS2P7-201ENST00000447334 885 ntBASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 AC087393.1-201ENST00000582896 145 ntBASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDH20Q8N6Y1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH20Q8N6Y1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDH20Q8N6Y1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH20Q8N6Y1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PCDH20Q8N6Y1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms