Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LAPTM4BQ86VI4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
LAPTM4BQ86VI4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.84■■□□□ 1.25
LAPTM4BQ86VI4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.84■■□□□ 1.25
LAPTM4BQ86VI4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 AC018755.3-202ENST00000596210 929 ntBASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 MIR6765-201ENST00000614092 87 ntBASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LAPTM4BQ86VI4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LAPTM4BQ86VI4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
LAPTM4BQ86VI4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.83■■□□□ 1.24
LAPTM4BQ86VI4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LAPTM4BQ86VI4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LAPTM4BQ86VI4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
LAPTM4BQ86VI4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.81■■□□□ 1.24
LAPTM4BQ86VI4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LAPTM4BQ86VI4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
LAPTM4BQ86VI4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.8■■□□□ 1.24
LAPTM4BQ86VI4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LAPTM4BQ86VI4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LAPTM4BQ86VI4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.8■■□□□ 1.24
LAPTM4BQ86VI4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
LAPTM4BQ86VI4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LAPTM4BQ86VI4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LAPTM4BQ86VI4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LAPTM4BQ86VI4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 BHLHE23-202ENST00000612929 1109 ntBASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LAPTM4BQ86VI4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LAPTM4BQ86VI4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LAPTM4BQ86VI4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LAPTM4BQ86VI4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.75■■□□□ 1.23
LAPTM4BQ86VI4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LAPTM4BQ86VI4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
LAPTM4BQ86VI4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
LAPTM4BQ86VI4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LAPTM4BQ86VI4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LAPTM4BQ86VI4 AC010980.1-201ENST00000587192 1142 ntBASIC22.73■■□□□ 1.23
LAPTM4BQ86VI4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.73■■□□□ 1.23
LAPTM4BQ86VI4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
LAPTM4BQ86VI4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.73■■□□□ 1.23
LAPTM4BQ86VI4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LAPTM4BQ86VI4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
LAPTM4BQ86VI4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
LAPTM4BQ86VI4 RARRES2P1-201ENST00000474487 481 ntBASIC22.72■■□□□ 1.23
LAPTM4BQ86VI4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LAPTM4BQ86VI4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LAPTM4BQ86VI4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 AC139795.1-202ENST00000500444 432 ntBASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
LAPTM4BQ86VI4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LAPTM4BQ86VI4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LAPTM4BQ86VI4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LAPTM4BQ86VI4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.7■■□□□ 1.22
LAPTM4BQ86VI4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
LAPTM4BQ86VI4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.69■■□□□ 1.22
LAPTM4BQ86VI4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms