Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 DUX4L18-201ENST00000553347 1267 ntBASIC23.05■■□□□ 1.28
RNF44Q7L0R7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF44Q7L0R7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF44Q7L0R7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF44Q7L0R7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF44Q7L0R7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF44Q7L0R7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF44Q7L0R7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF44Q7L0R7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF44Q7L0R7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF44Q7L0R7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF44Q7L0R7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF44Q7L0R7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF44Q7L0R7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF44Q7L0R7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF44Q7L0R7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF44Q7L0R7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23■■□□□ 1.27
RNF44Q7L0R7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
RNF44Q7L0R7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF44Q7L0R7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF44Q7L0R7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 KRT18P10-201ENST00000388836 1287 ntBASIC22.98■■□□□ 1.27
RNF44Q7L0R7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF44Q7L0R7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF44Q7L0R7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF44Q7L0R7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF44Q7L0R7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF44Q7L0R7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF44Q7L0R7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
RNF44Q7L0R7 AC092803.2-201ENST00000564287 1899 ntBASIC22.96■■□□□ 1.27
RNF44Q7L0R7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 RPS2P7-201ENST00000447334 885 ntBASIC22.95■■□□□ 1.26
RNF44Q7L0R7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF44Q7L0R7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 AC087393.1-201ENST00000582896 145 ntBASIC22.94■■□□□ 1.26
RNF44Q7L0R7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF44Q7L0R7 ERN1-208ENST00000606895 2068 ntBASIC22.94■■□□□ 1.26
RNF44Q7L0R7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RNF44Q7L0R7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF44Q7L0R7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF44Q7L0R7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF44Q7L0R7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF44Q7L0R7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF44Q7L0R7 AC010501.1-201ENST00000606270 1962 ntBASIC22.92■■□□□ 1.26
RNF44Q7L0R7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.92■■□□□ 1.26
RNF44Q7L0R7 AC139795.1-202ENST00000500444 432 ntBASIC22.92■■□□□ 1.26
RNF44Q7L0R7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms