Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 AL135925.1-201ENST00000605920 1701 ntBASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 AC131281.2-201ENST00000520478 145 ntBASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 RARRES2P6-201ENST00000567333 442 ntBASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.75■□□□□ 0.91
SPNS3Q6ZMD2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 AC133561.4-201ENST00000566112 224 ntBASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 AC110285.6-201ENST00000617652 491 ntBASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SPNS3Q6ZMD2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 AC104564.3-201ENST00000582367 638 ntBASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SPNS3Q6ZMD2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 AC087393.1-201ENST00000582896 145 ntBASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPNS3Q6ZMD2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 AL136116.3-201ENST00000402907 1138 ntBASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SPNS3Q6ZMD2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPNS3Q6ZMD2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPNS3Q6ZMD2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPNS3Q6ZMD2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.69■□□□□ 0.9
SPNS3Q6ZMD2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPNS3Q6ZMD2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPNS3Q6ZMD2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.67■□□□□ 0.9
SPNS3Q6ZMD2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.67■□□□□ 0.9
SPNS3Q6ZMD2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.67■□□□□ 0.9
SPNS3Q6ZMD2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPNS3Q6ZMD2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPNS3Q6ZMD2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPNS3Q6ZMD2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.64■□□□□ 0.9
SPNS3Q6ZMD2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
SPNS3Q6ZMD2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.64■□□□□ 0.89
SPNS3Q6ZMD2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPNS3Q6ZMD2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.64■□□□□ 0.89
SPNS3Q6ZMD2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.64■□□□□ 0.89
SPNS3Q6ZMD2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SPNS3Q6ZMD2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPNS3Q6ZMD2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms