Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.59■■□□□ 1.21
RPP38P78345 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.59■■□□□ 1.21
RPP38P78345 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPP38P78345 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RPP38P78345 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RPP38P78345 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.58■■□□□ 1.21
RPP38P78345 MIR3960-201ENST00000583311 91 ntBASIC22.58■■□□□ 1.21
RPP38P78345 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RPP38P78345 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RPP38P78345 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RPP38P78345 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.57■■□□□ 1.2
RPP38P78345 AC025884.2-201ENST00000553429 711 ntBASIC22.57■■□□□ 1.2
RPP38P78345 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP38P78345 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPP38P78345 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.56■■□□□ 1.2
RPP38P78345 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.56■■□□□ 1.2
RPP38P78345 AC007029.1-201ENST00000604183 313 ntBASIC22.56■■□□□ 1.2
RPP38P78345 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP38P78345 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP38P78345 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP38P78345 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP38P78345 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 AL359504.2-201ENST00000605506 1601 ntBASIC22.54■■□□□ 1.2
RPP38P78345 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP38P78345 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP38P78345 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP38P78345 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.53■■□□□ 1.2
RPP38P78345 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP38P78345 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPP38P78345 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP38P78345 ERN1-208ENST00000606895 2068 ntBASIC22.53■■□□□ 1.2
RPP38P78345 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.52■■□□□ 1.2
RPP38P78345 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RPP38P78345 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.52■■□□□ 1.2
RPP38P78345 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RPP38P78345 AC142472.1-201ENST00000612013 1741 ntBASIC22.51■■□□□ 1.19
RPP38P78345 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.51■■□□□ 1.19
RPP38P78345 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP38P78345 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RPP38P78345 RP9P-202ENST00000450133 1212 ntBASIC22.51■■□□□ 1.19
RPP38P78345 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.51■■□□□ 1.19
RPP38P78345 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPP38P78345 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPP38P78345 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPP38P78345 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.5■■□□□ 1.19
RPP38P78345 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.5■■□□□ 1.19
RPP38P78345 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP38P78345 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
RPP38P78345 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RPP38P78345 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.49■■□□□ 1.19
RPP38P78345 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RPP38P78345 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
RPP38P78345 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.49■■□□□ 1.19
RPP38P78345 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RPP38P78345 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP38P78345 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
RPP38P78345 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP38P78345 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP38P78345 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RPP38P78345 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP38P78345 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RPP38P78345 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RPP38P78345 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
RPP38P78345 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.47■■□□□ 1.19
RPP38P78345 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.47■■□□□ 1.19
RPP38P78345 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.46■■□□□ 1.19
RPP38P78345 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP38P78345 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RPP38P78345 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.46■■□□□ 1.19
RPP38P78345 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.46■■□□□ 1.19
RPP38P78345 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RPP38P78345 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RPP38P78345 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP38P78345 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.45■■□□□ 1.18
RPP38P78345 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RPP38P78345 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RPP38P78345 NTF6A-201ENST00000591175 560 ntBASIC22.45■■□□□ 1.18
RPP38P78345 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.45■■□□□ 1.18
RPP38P78345 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RPP38P78345 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RPP38P78345 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.44■■□□□ 1.18
RPP38P78345 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.44■■□□□ 1.18
RPP38P78345 AC093536.1-201ENST00000569153 554 ntBASIC22.44■■□□□ 1.18
RPP38P78345 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPP38P78345 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RPP38P78345 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RPP38P78345 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RPP38P78345 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.43■■□□□ 1.18
RPP38P78345 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms