Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM27A0A1W2PRY6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMIM27A0A1W2PRY6 AC141586.4-201ENST00000624558 1573 ntBASIC17.96■□□□□ 0.46
SMIM27A0A1W2PRY6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM27A0A1W2PRY6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.94■□□□□ 0.46
SMIM27A0A1W2PRY6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM27A0A1W2PRY6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM27A0A1W2PRY6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM27A0A1W2PRY6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM27A0A1W2PRY6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SMIM27A0A1W2PRY6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMIM27A0A1W2PRY6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMIM27A0A1W2PRY6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM27A0A1W2PRY6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM27A0A1W2PRY6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMIM27A0A1W2PRY6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMIM27A0A1W2PRY6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM27A0A1W2PRY6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SMIM27A0A1W2PRY6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM27A0A1W2PRY6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms