Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPVL3A0A0U1RRI6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPVL3A0A0U1RRI6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPVL3A0A0U1RRI6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPVL3A0A0U1RRI6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPVL3A0A0U1RRI6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPVL3A0A0U1RRI6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPVL3A0A0U1RRI6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 LONRF2P2-201ENST00000439212 571 ntBASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPVL3A0A0U1RRI6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
CENPVL3A0A0U1RRI6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPVL3A0A0U1RRI6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPVL3A0A0U1RRI6 AL451085.2-201ENST00000605085 799 ntBASIC19.56■□□□□ 0.72
CENPVL3A0A0U1RRI6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPVL3A0A0U1RRI6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPVL3A0A0U1RRI6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPVL3A0A0U1RRI6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CENPVL3A0A0U1RRI6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPVL3A0A0U1RRI6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.52■□□□□ 0.72
CENPVL3A0A0U1RRI6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
CENPVL3A0A0U1RRI6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 AL035685.1-201ENST00000636663 812 ntBASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CENPVL3A0A0U1RRI6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 AC103724.3-201ENST00000564481 992 ntBASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.5■□□□□ 0.71
CENPVL3A0A0U1RRI6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CENPVL3A0A0U1RRI6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CENPVL3A0A0U1RRI6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 AL031848.2-201ENST00000607670 837 ntBASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CENPVL3A0A0U1RRI6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 AL121749.1-202ENST00000609313 2153 ntBASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms