Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA5Q96FF9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 SLC7A15P-201ENST00000424028 1363 ntBASIC19.61■□□□□ 0.73
CDCA5Q96FF9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 AL138781.2-201ENST00000617896 1843 ntBASIC19.61■□□□□ 0.73
CDCA5Q96FF9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 TTTY23B-201ENST00000442790 549 ntBASIC19.61■□□□□ 0.73
CDCA5Q96FF9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 RNA5SP410-201ENST00000516285 106 ntBASIC19.61■□□□□ 0.73
CDCA5Q96FF9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 AC044860.1-202ENST00000559481 777 ntBASIC19.61■□□□□ 0.73
CDCA5Q96FF9 MIR4259-201ENST00000584466 101 ntBASIC19.61■□□□□ 0.73
CDCA5Q96FF9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
CDCA5Q96FF9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 AC098859.1-201ENST00000502915 1238 ntBASIC19.6■□□□□ 0.73
CDCA5Q96FF9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 AL512343.1-201ENST00000605837 169 ntBASIC19.6■□□□□ 0.73
CDCA5Q96FF9 AL033527.4-201ENST00000641026 673 ntBASIC19.6■□□□□ 0.73
CDCA5Q96FF9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA5Q96FF9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.59■□□□□ 0.73
CDCA5Q96FF9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 AL355312.1-201ENST00000407115 2176 ntBASIC19.59■□□□□ 0.73
CDCA5Q96FF9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 SLC25A1P3-201ENST00000395415 828 ntBASIC19.59■□□□□ 0.73
CDCA5Q96FF9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA5Q96FF9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms