Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATF1P18846 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATF1P18846 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATF1P18846 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.95□□□□□ -0.02
ATF1P18846 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.95□□□□□ -0.02
ATF1P18846 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATF1P18846 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ATF1P18846 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.95□□□□□ -0.02
ATF1P18846 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 KRT8P10-201ENST00000450021 1447 ntBASIC14.94□□□□□ -0.02
ATF1P18846 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 KRT8P26-201ENST00000534154 1276 ntBASIC14.94□□□□□ -0.02
ATF1P18846 AL136038.3-201ENST00000561909 1096 ntBASIC14.94□□□□□ -0.02
ATF1P18846 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
ATF1P18846 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATF1P18846 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.94□□□□□ -0.02
ATF1P18846 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 AL391256.1-201ENST00000443260 1855 ntBASIC14.93□□□□□ -0.02
ATF1P18846 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 FRMD8P1-201ENST00000440433 1524 ntBASIC14.93□□□□□ -0.02
ATF1P18846 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.93□□□□□ -0.02
ATF1P18846 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.93□□□□□ -0.02
ATF1P18846 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
ATF1P18846 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
ATF1P18846 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.93□□□□□ -0.02
ATF1P18846 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 RN7SL850P-201ENST00000579959 291 ntBASIC14.93□□□□□ -0.02
ATF1P18846 STK25P1-201ENST00000585406 838 ntBASIC14.93□□□□□ -0.02
ATF1P18846 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.93□□□□□ -0.02
ATF1P18846 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 AL645728.1-201ENST00000366221 2101 ntBASIC14.93□□□□□ -0.02
ATF1P18846 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ATF1P18846 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ATF1P18846 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.93□□□□□ -0.02
ATF1P18846 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ATF1P18846 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
ATF1P18846 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ATF1P18846 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms