Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HTR3AP46098 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
HTR3AP46098 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.76■□□□□ 0.11
HTR3AP46098 TSPY19P-201ENST00000418461 509 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 TSPY18P-201ENST00000441642 509 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 AC132008.2-207ENST00000454517 770 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 KRT18P31-201ENST00000506277 1292 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.76■□□□□ 0.11
HTR3AP46098 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.76■□□□□ 0.11
HTR3AP46098 AC073592.4-201ENST00000623827 446 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.76■□□□□ 0.11
HTR3AP46098 AC026691.1-201ENST00000602502 2017 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.76■□□□□ 0.11
HTR3AP46098 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
HTR3AP46098 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.76■□□□□ 0.11
HTR3AP46098 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3AP46098 AP005117.1-201ENST00000584346 1413 ntBASIC15.76■□□□□ 0.11
HTR3AP46098 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HTR3AP46098 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HTR3AP46098 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HTR3AP46098 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
HTR3AP46098 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HTR3AP46098 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.75■□□□□ 0.11
HTR3AP46098 AC106795.1-205ENST00000512851 1056 ntBASIC15.75■□□□□ 0.11
HTR3AP46098 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.75■□□□□ 0.11
HTR3AP46098 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.75■□□□□ 0.11
HTR3AP46098 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.75■□□□□ 0.11
HTR3AP46098 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.75■□□□□ 0.11
HTR3AP46098 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HTR3AP46098 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.75■□□□□ 0.11
HTR3AP46098 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HTR3AP46098 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 AC079776.2-201ENST00000641154 1609 ntBASIC15.75■□□□□ 0.11
HTR3AP46098 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HTR3AP46098 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.75■□□□□ 0.11
HTR3AP46098 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.74■□□□□ 0.11
HTR3AP46098 AC093525.9-201ENST00000624961 1746 ntBASIC15.74■□□□□ 0.11
HTR3AP46098 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
HTR3AP46098 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR3AP46098 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.74■□□□□ 0.11
HTR3AP46098 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.74■□□□□ 0.11
HTR3AP46098 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.74■□□□□ 0.11
HTR3AP46098 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 AL135999.2-201ENST00000622438 1686 ntBASIC15.74■□□□□ 0.11
HTR3AP46098 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.74■□□□□ 0.11
HTR3AP46098 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR3AP46098 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR3AP46098 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HTR3AP46098 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR3AP46098 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR3AP46098 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR3AP46098 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms