Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.41□□□□□ -0.26
TRGV3P03979 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.41□□□□□ -0.26
TRGV3P03979 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.41□□□□□ -0.26
TRGV3P03979 AC105339.3-201ENST00000560043 636 ntBASIC13.41□□□□□ -0.26
TRGV3P03979 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.41□□□□□ -0.26
TRGV3P03979 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRGV3P03979 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRGV3P03979 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV3P03979 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 AL590787.1-201ENST00000568856 1315 ntBASIC13.4□□□□□ -0.26
TRGV3P03979 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRGV3P03979 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV3P03979 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 LINC02012-201ENST00000608206 1725 ntBASIC13.4□□□□□ -0.26
TRGV3P03979 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.4□□□□□ -0.26
TRGV3P03979 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRGV3P03979 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRGV3P03979 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.4□□□□□ -0.26
TRGV3P03979 AC079776.4-201ENST00000511039 504 ntBASIC13.4□□□□□ -0.26
TRGV3P03979 AC136632.2-201ENST00000512891 861 ntBASIC13.4□□□□□ -0.26
TRGV3P03979 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.4□□□□□ -0.26
TRGV3P03979 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 FAM215A-202ENST00000632077 792 ntBASIC13.4□□□□□ -0.26
TRGV3P03979 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.4□□□□□ -0.26
TRGV3P03979 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV3P03979 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 AC006504.4-201ENST00000592118 1568 ntBASIC13.4□□□□□ -0.26
TRGV3P03979 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRGV3P03979 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV3P03979 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRGV3P03979 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.4□□□□□ -0.27
TRGV3P03979 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRGV3P03979 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRGV3P03979 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRGV3P03979 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRGV3P03979 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRGV3P03979 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.39□□□□□ -0.27
TRGV3P03979 SLC25A1P3-201ENST00000395415 828 ntBASIC13.39□□□□□ -0.27
TRGV3P03979 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 AC026396.1-201ENST00000419388 421 ntBASIC13.39□□□□□ -0.27
TRGV3P03979 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.39□□□□□ -0.27
TRGV3P03979 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.39□□□□□ -0.27
TRGV3P03979 AC092910.1-201ENST00000482027 1129 ntBASIC13.39□□□□□ -0.27
TRGV3P03979 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.39□□□□□ -0.27
TRGV3P03979 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV3P03979 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.39□□□□□ -0.27
TRGV3P03979 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.39□□□□□ -0.27
TRGV3P03979 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.39□□□□□ -0.27
TRGV3P03979 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms