Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 AC106820.2-201ENST00000563775 3264 ntBASIC20.03■□□□□ 0.8
RNF41Q9H4P4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 PMS2P7-201ENST00000506558 1336 ntBASIC20.02■□□□□ 0.8
RNF41Q9H4P4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 AP002490.2-201ENST00000524791 560 ntBASIC20.02■□□□□ 0.8
RNF41Q9H4P4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 MPDU1-223ENST00000582151 728 ntBASIC20.02■□□□□ 0.8
RNF41Q9H4P4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 AC023141.13-201ENST00000604991 943 ntBASIC20.02■□□□□ 0.8
RNF41Q9H4P4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF41Q9H4P4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.02■□□□□ 0.79
RNF41Q9H4P4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 AL513480.1-201ENST00000451731 511 ntBASIC20.01■□□□□ 0.79
RNF41Q9H4P4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 AC040169.1-201ENST00000565382 521 ntBASIC20.01■□□□□ 0.79
RNF41Q9H4P4 AC018845.2-201ENST00000568326 409 ntBASIC20.01■□□□□ 0.79
RNF41Q9H4P4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF41Q9H4P4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20■□□□□ 0.79
RNF41Q9H4P4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20■□□□□ 0.79
RNF41Q9H4P4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 HCG4-201ENST00000418983 998 ntBASIC20■□□□□ 0.79
RNF41Q9H4P4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms