Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LTFP02788 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.79■□□□□ 0.44
LTFP02788 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LTFP02788 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LTFP02788 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LTFP02788 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.78■□□□□ 0.44
LTFP02788 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.78■□□□□ 0.44
LTFP02788 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.78■□□□□ 0.44
LTFP02788 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LTFP02788 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LTFP02788 AL021920.2-201ENST00000624828 1351 ntBASIC17.78■□□□□ 0.44
LTFP02788 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.77■□□□□ 0.44
LTFP02788 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LTFP02788 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.77■□□□□ 0.44
LTFP02788 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LTFP02788 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.77■□□□□ 0.44
LTFP02788 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
LTFP02788 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LTFP02788 MIR940-201ENST00000401276 94 ntBASIC17.77■□□□□ 0.44
LTFP02788 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.77■□□□□ 0.44
LTFP02788 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.77■□□□□ 0.44
LTFP02788 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.77■□□□□ 0.44
LTFP02788 KRT18P3-201ENST00000451602 1288 ntBASIC17.77■□□□□ 0.44
LTFP02788 RNA5SP416-201ENST00000516838 111 ntBASIC17.77■□□□□ 0.44
LTFP02788 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.77■□□□□ 0.44
LTFP02788 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.77■□□□□ 0.44
LTFP02788 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LTFP02788 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.77■□□□□ 0.44
LTFP02788 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.77■□□□□ 0.44
LTFP02788 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LTFP02788 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LTFP02788 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.77■□□□□ 0.43
LTFP02788 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
LTFP02788 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LTFP02788 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LTFP02788 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.77■□□□□ 0.43
LTFP02788 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
LTFP02788 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LTFP02788 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LTFP02788 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
LTFP02788 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
LTFP02788 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LTFP02788 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LTFP02788 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.76■□□□□ 0.43
LTFP02788 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.76■□□□□ 0.43
LTFP02788 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 TUBB8P12-201ENST00000308911 1335 ntBASIC17.76■□□□□ 0.43
LTFP02788 TUBB7P-202ENST00000428444 1305 ntBASIC17.76■□□□□ 0.43
LTFP02788 TUBB8P7-204ENST00000567960 1332 ntBASIC17.76■□□□□ 0.43
LTFP02788 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LTFP02788 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms