RNA–Protein interactions for RNA: ENST00000556095.5

GSKIP-207, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GSKIP, Length 3,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-207ENST00000556095 NISCHQ9Y2I1 1504 aa32.95■■■□□ 2.87
GSKIP-207ENST00000556095 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
GSKIP-207ENST00000556095 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
GSKIP-207ENST00000556095 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
GSKIP-207ENST00000556095 EHMT2Q96KQ7 1210 aa28.9■■■□□ 2.22
GSKIP-207ENST00000556095 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
GSKIP-207ENST00000556095 PCGF6Q9BYE7 350 aa28.37■■■□□ 2.13
GSKIP-207ENST00000556095 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.09
GSKIP-207ENST00000556095 LOC105371045A0A1W2PR82 267 aa28.04■■■□□ 2.08
GSKIP-207ENST00000556095 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
GSKIP-207ENST00000556095 TTBK1Q5TCY1 1321 aaPredicted RBP27.82■■■□□ 2.04
GSKIP-207ENST00000556095 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
GSKIP-207ENST00000556095 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
GSKIP-207ENST00000556095 ABCC9O60706 1549 aa27.39■■□□□ 1.98
GSKIP-207ENST00000556095 HRCP23327 699 aa27.35■■□□□ 1.97
GSKIP-207ENST00000556095 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
GSKIP-207ENST00000556095 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
GSKIP-207ENST00000556095 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
GSKIP-207ENST00000556095 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
GSKIP-207ENST00000556095 CCDC180Q9P1Z9 1646 aa26.98■■□□□ 1.91
GSKIP-207ENST00000556095 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.91
GSKIP-207ENST00000556095 CCER1Q8TC90 406 aaPredicted RBP26.89■■□□□ 1.9
GSKIP-207ENST00000556095 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
GSKIP-207ENST00000556095 APLP2Q06481 763 aa26.72■■□□□ 1.87
GSKIP-207ENST00000556095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
GSKIP-207ENST00000556095 ZEB1P37275 1124 aaPredicted RBP26.57■■□□□ 1.84
GSKIP-207ENST00000556095 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
GSKIP-207ENST00000556095 HNRNPUL2Q1KMD3 747 aaKnown RBP26.4■■□□□ 1.82
GSKIP-207ENST00000556095 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
GSKIP-207ENST00000556095 YTHDC1Q96MU7 727 aaKnown RBP26.26■■□□□ 1.79
GSKIP-207ENST00000556095 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
GSKIP-207ENST00000556095 ITGAEP38570 1179 aa26.19■■□□□ 1.78
GSKIP-207ENST00000556095 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
GSKIP-207ENST00000556095 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
GSKIP-207ENST00000556095 RB1CC1Q8TDY2 1594 aa25.96■■□□□ 1.75
GSKIP-207ENST00000556095 CENPBP07199 599 aaPredicted RBP25.87■■□□□ 1.73
GSKIP-207ENST00000556095 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
GSKIP-207ENST00000556095 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
GSKIP-207ENST00000556095 NACADO15069 1562 aa25.71■■□□□ 1.71
GSKIP-207ENST00000556095 P3H3Q8IVL6 736 aa25.62■■□□□ 1.69
GSKIP-207ENST00000556095 WIZO95785 1651 aa25.58■■□□□ 1.68
GSKIP-207ENST00000556095 SOGA1O94964 1423 aa25.56■■□□□ 1.68
GSKIP-207ENST00000556095 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
GSKIP-207ENST00000556095 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
GSKIP-207ENST00000556095 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
GSKIP-207ENST00000556095 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
GSKIP-207ENST00000556095 GTF3C3Q9Y5Q9 886 aa25.43■■□□□ 1.66
GSKIP-207ENST00000556095 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
GSKIP-207ENST00000556095 ZNF316A6NFI3 1004 aaPredicted RBP25.38■■□□□ 1.65
GSKIP-207ENST00000556095 NEUROD1Q13562 356 aa25.38■■□□□ 1.65
GSKIP-207ENST00000556095 WRNQ14191 1432 aaPredicted RBP eCLIP25.33■■□□□ 1.65
GSKIP-207ENST00000556095 ARID3CA6NKF2 412 aa25.29■■□□□ 1.64
GSKIP-207ENST00000556095 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
GSKIP-207ENST00000556095 CNGB1Q14028 1251 aaPredicted RBP25.25■■□□□ 1.63
GSKIP-207ENST00000556095 CLIP1P30622 1438 aa25.25■■□□□ 1.63
GSKIP-207ENST00000556095 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
GSKIP-207ENST00000556095 ACIN1Q9UKV3 1341 aaKnown RBP25.23■■□□□ 1.63
GSKIP-207ENST00000556095 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
GSKIP-207ENST00000556095 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.62
GSKIP-207ENST00000556095 GOLGA3Q08378 1498 aa25.1■■□□□ 1.61
GSKIP-207ENST00000556095 MIER1Q8N108 512 aa25.09■■□□□ 1.61
GSKIP-207ENST00000556095 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
GSKIP-207ENST00000556095 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
GSKIP-207ENST00000556095 HIRIP3Q9BW71 556 aaPredicted RBP24.99■■□□□ 1.59
GSKIP-207ENST00000556095 EEA1Q15075 1411 aa24.96■■□□□ 1.59
GSKIP-207ENST00000556095 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.59
GSKIP-207ENST00000556095 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
GSKIP-207ENST00000556095 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
GSKIP-207ENST00000556095 BCANQ96GW7 911 aa24.92■■□□□ 1.58
GSKIP-207ENST00000556095 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
GSKIP-207ENST00000556095 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
GSKIP-207ENST00000556095 FBLN2P98095 1184 aa24.88■■□□□ 1.57
GSKIP-207ENST00000556095 DDX10Q13206 875 aaKnown RBP24.79■■□□□ 1.56
GSKIP-207ENST00000556095 NEFLP07196 543 aa24.78■■□□□ 1.56
GSKIP-207ENST00000556095 CHIC2Q9UKJ5 165 aa24.78■■□□□ 1.56
GSKIP-207ENST00000556095 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
GSKIP-207ENST00000556095 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
GSKIP-207ENST00000556095 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
GSKIP-207ENST00000556095 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
GSKIP-207ENST00000556095 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
GSKIP-207ENST00000556095 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
GSKIP-207ENST00000556095 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
GSKIP-207ENST00000556095 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
GSKIP-207ENST00000556095 CUX2O14529 1486 aa24.59■■□□□ 1.53
GSKIP-207ENST00000556095 RRP7BPQ9NSQ0 103 aa24.54■■□□□ 1.52
GSKIP-207ENST00000556095 ANP32CO43423 234 aa24.53■■□□□ 1.52
GSKIP-207ENST00000556095 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
GSKIP-207ENST00000556095 MTUS2Q5JR59 1369 aa24.47■■□□□ 1.51
GSKIP-207ENST00000556095 CCNB3Q8WWL7 1395 aa24.44■■□□□ 1.5
GSKIP-207ENST00000556095 MYT1LQ9UL68 1186 aa24.43■■□□□ 1.5
GSKIP-207ENST00000556095 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
GSKIP-207ENST00000556095 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
GSKIP-207ENST00000556095 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
GSKIP-207ENST00000556095 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
GSKIP-207ENST00000556095 FKBP8Q14318 412 aa24.36■■□□□ 1.49
GSKIP-207ENST00000556095 ERICH6Q7L0X2 663 aa24.28■■□□□ 1.48
GSKIP-207ENST00000556095 KCNH8Q96L42 1107 aa24.28■■□□□ 1.48
GSKIP-207ENST00000556095 RAB3GAP2Q9H2M9 1393 aa24.25■■□□□ 1.47
GSKIP-207ENST00000556095 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
GSKIP-207ENST00000556095 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms