Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 SLC25A1P3-201ENST00000395415 828 ntBASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 AC034232.1-201ENST00000506026 1064 ntBASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 EGLN1P1-201ENST00000531623 762 ntBASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.32□□□□□ -0.12
KCNIP3Q9Y2W7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 AC096633.1-201ENST00000422446 749 ntBASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCNIP3Q9Y2W7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 AL662844.4-201ENST00000606367 2838 ntBASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KCNIP3Q9Y2W7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms