Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CALYQ9NYX4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.12□□□□□ -0.15
CALYQ9NYX4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CALYQ9NYX4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.12□□□□□ -0.15
CALYQ9NYX4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.11□□□□□ -0.15
CALYQ9NYX4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 AF238378.1-201ENST00000526806 358 ntBASIC14.11□□□□□ -0.15
CALYQ9NYX4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.11□□□□□ -0.15
CALYQ9NYX4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CALYQ9NYX4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CALYQ9NYX4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CALYQ9NYX4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CALYQ9NYX4 AC243591.1-201ENST00000452967 1364 ntBASIC14.1□□□□□ -0.15
CALYQ9NYX4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.1□□□□□ -0.15
CALYQ9NYX4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.1□□□□□ -0.15
CALYQ9NYX4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.1□□□□□ -0.15
CALYQ9NYX4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.1□□□□□ -0.15
CALYQ9NYX4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CALYQ9NYX4 AP002414.1-201ENST00000391405 1147 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms