Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ABL1-203ENST00000393293 532 ntTSL 56.43□□□□□ -1.389e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.399e-6■■□□□ 13.2
XRN2Q9H0D6 BSCL2-223ENST00000531524 844 ntTSL 36.17□□□□□ -1.429e-6■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-207ENST00000472202 782 ntTSL 25.93□□□□□ -1.469e-6■■□□□ 13.2
XRN2Q9H0D6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.93□□□□□ -1.469e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.71□□□□□ -1.59e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-212ENST00000529046 571 ntTSL 45.15□□□□□ -1.599e-6■■□□□ 13.2
XRN2Q9H0D6 PRH1-202ENST00000536086 554 ntTSL 55.14□□□□□ -1.599e-6■■□□□ 13.2
XRN2Q9H0D6 PRR4-214ENST00000546317 281 ntTSL 55.05□□□□□ -1.69e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-211ENST00000525970 503 ntTSL 44.78□□□□□ -1.649e-6■■□□□ 13.2
XRN2Q9H0D6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.66□□□□□ -1.669e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-209ENST00000525132 521 ntTSL 54.48□□□□□ -1.699e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-210ENST00000525878 626 ntTSL 44.31□□□□□ -1.729e-6■■□□□ 13.2
XRN2Q9H0D6 PLIN2-205ENST00000464326 790 ntTSL 24.13□□□□□ -1.759e-6■■□□□ 13.2
XRN2Q9H0D6 CSDE1-208ENST00000524652 562 ntTSL 43.23□□□□□ -1.899e-6■■□□□ 13.2
XRN2Q9H0D6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.71■■■□□ 2.035e-7■■□□□ 13.2
XRN2Q9H0D6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.82■■□□□ 1.725e-7■■□□□ 13.2
XRN2Q9H0D6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18■□□□□ 0.475e-7■■□□□ 13.2
XRN2Q9H0D6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.39■□□□□ 0.375e-7■■□□□ 13.2
XRN2Q9H0D6 NDRG1-203ENST00000517331 584 ntTSL 518.74■□□□□ 0.598e-8■■□□□ 13.2
XRN2Q9H0D6 NDRG1-221ENST00000522377 1103 ntTSL 515.36■□□□□ 0.058e-8■■□□□ 13.2
XRN2Q9H0D6 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.45□□□□□ -0.421e-6■■□□□ 13.2
XRN2Q9H0D6 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC12.44□□□□□ -0.421e-6■■□□□ 13.2
XRN2Q9H0D6 FBXO31-202ENST00000561664 305 ntTSL 517.33■□□□□ 0.361e-9■■□□□ 13.2
XRN2Q9H0D6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.53■■■□□ 2.482e-8■■□□□ 13.2
XRN2Q9H0D6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.09■■□□□ 1.452e-8■■□□□ 13.2
XRN2Q9H0D6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.16■■□□□ 1.142e-8■■□□□ 13.2
XRN2Q9H0D6 TPTEP1-202ENST00000400593 1430 ntTSL 1 (best)18.06■□□□□ 0.482e-8■■□□□ 13.2
XRN2Q9H0D6 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC14.02□□□□□ -0.172e-8■■□□□ 13.2
XRN2Q9H0D6 TPTEP1-204ENST00000426585 5725 ntTSL 1 (best)12.87□□□□□ -0.352e-8■■□□□ 13.2
XRN2Q9H0D6 DMWD-203ENST00000537879 843 ntTSL 1 (best)16.11■□□□□ 0.179e-8■■□□□ 13.2
XRN2Q9H0D6 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.98■□□□□ 0.153e-6■■□□□ 13.2
XRN2Q9H0D6 AC138409.2-202ENST00000507274 458 ntBASIC6.1□□□□□ -1.433e-6■■□□□ 13.2
XRN2Q9H0D6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.76□□□□□ -1.173e-7■■□□□ 13.2
XRN2Q9H0D6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.013e-6■■□□□ 13.2
XRN2Q9H0D6 ARAP1-210ENST00000465814 5612 ntTSL 214.61□□□□□ -0.073e-6■■□□□ 13.2
XRN2Q9H0D6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.163e-6■■□□□ 13.2
XRN2Q9H0D6 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.193e-6■■□□□ 13.2
XRN2Q9H0D6 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.593e-6■■□□□ 13.2
XRN2Q9H0D6 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.773e-6■■□□□ 13.2
XRN2Q9H0D6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.755e-6■■□□□ 13.1
XRN2Q9H0D6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.165e-6■■□□□ 13.1
XRN2Q9H0D6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.095e-6■■□□□ 13.1
XRN2Q9H0D6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.056e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.85■■□□□ 1.416e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.72■■□□□ 1.396e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-204ENST00000421787 1924 ntTSL 222.25■■□□□ 1.156e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.25■■□□□ 1.156e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-207ENST00000478180 963 ntTSL 521.55■■□□□ 1.046e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-201ENST00000028008 1220 ntTSL 521.13■□□□□ 0.976e-9■■□□□ 13.1
XRN2Q9H0D6 GRAMD1A-207ENST00000598118 2277 ntTSL 1 (best)19.57■□□□□ 0.726e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.686e-9■■□□□ 13.1
XRN2Q9H0D6 RNASET2-202ENST00000358165 2445 ntTSL 217.56■□□□□ 0.46e-9■■□□□ 13.1
XRN2Q9H0D6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.416e-9■■□□□ 13.1
XRN2Q9H0D6 SPHK1-205ENST00000588682 858 ntTSL 322.83■■□□□ 1.259e-7■■□□□ 13.1
XRN2Q9H0D6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.889e-7■■□□□ 13.1
XRN2Q9H0D6 SEPT9-219ENST00000588575 559 ntTSL 424.19■■□□□ 1.461e-6■■□□□ 13.1
XRN2Q9H0D6 GAPDH-210ENST00000496049 390 ntTSL 216.85■□□□□ 0.299e-7■■□□□ 13.1
XRN2Q9H0D6 PAM16-210ENST00000575636 732 ntTSL 320.77■□□□□ 0.925e-6■■□□□ 13.1
XRN2Q9H0D6 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.212e-6■■□□□ 13.1
XRN2Q9H0D6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.26■■□□□ 1.472e-6■■□□□ 13.1
XRN2Q9H0D6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.812e-6■■□□□ 13.1
XRN2Q9H0D6 FOXP4-206ENST00000451305 367 ntTSL 1 (best)19.87■□□□□ 0.779e-7■■□□□ 13.1
XRN2Q9H0D6 CXXC5-214ENST00000512816 558 ntTSL 319.28■□□□□ 0.682e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.463e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.273e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.06■□□□□ 0.163e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.25■□□□□ 0.033e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.22□□□□□ -0.133e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.8□□□□□ -0.23e-6■■□□□ 13.1
XRN2Q9H0D6 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.224e-7■■□□□ 13.1
XRN2Q9H0D6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.42□□□□□ -0.263e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-216ENST00000564136 3071 ntTSL 213.41□□□□□ -0.263e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.92□□□□□ -0.343e-6■■□□□ 13.1
XRN2Q9H0D6 PROC-209ENST00000464089 563 ntTSL 421.55■■□□□ 1.041e-8■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-209ENST00000630114 1433 ntTSL 524.27■■□□□ 1.485e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)20.66■□□□□ 0.95e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.895e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.755e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)19.29■□□□□ 0.685e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-205ENST00000514511 1143 ntTSL 218.87■□□□□ 0.615e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.085e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.76□□□□□ -0.215e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.665e-22■■□□□ 13.1
XRN2Q9H0D6 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.795e-22■■□□□ 13.1
XRN2Q9H0D6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.9■□□□□ 0.31e-6■■□□□ 13.1
XRN2Q9H0D6 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■■□□□ 13.1
XRN2Q9H0D6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.33■□□□□ 0.524e-6■■□□□ 13.1
XRN2Q9H0D6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.07■□□□□ 0.323e-16■■□□□ 13.1
XRN2Q9H0D6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.163e-16■■□□□ 13.1
XRN2Q9H0D6 TRIM27-205ENST00000481474 7006 ntTSL 1 (best)11.42□□□□□ -0.583e-16■■□□□ 13.1
XRN2Q9H0D6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.794e-11■■□□□ 13.1
XRN2Q9H0D6 RPS12-202ENST00000484616 639 ntTSL 25.14□□□□□ -1.594e-11■■□□□ 13.1
XRN2Q9H0D6 MTA1-210ENST00000481012 987 ntTSL 520.5■□□□□ 0.872e-6■■□□□ 13.1
XRN2Q9H0D6 MTA1-204ENST00000424723 904 ntTSL 1 (best)18.59■□□□□ 0.572e-6■■□□□ 13.1
XRN2Q9H0D6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.43■■□□□ 1.988e-9■■□□□ 13.1
XRN2Q9H0D6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.668e-9■■□□□ 13.1
XRN2Q9H0D6 NARF-217ENST00000581743 785 ntTSL 520.24■□□□□ 0.833e-6■■□□□ 13.1
XRN2Q9H0D6 KIFC3-209ENST00000562311 777 ntTSL 530.64■■■□□ 2.53e-7■■□□□ 13.1
XRN2Q9H0D6 LITAF-213ENST00000574701 553 ntTSL 428.13■■■□□ 2.093e-7■■□□□ 13.1
Retrieved 100 of 21,068 protein–RNA pairs in 118.5 ms