RNA–Protein interactions for RNA: ENST00000400593.6

TPTEP1-202, Transcript of TPTE pseudogene 1, humanhuman

TSL 1 (best)

Gene TPTEP1, Length 1,430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTEP1-202ENST00000400593 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
TPTEP1-202ENST00000400593 ABCC9O60706 1549 aa34.22■■■■□ 3.07
TPTEP1-202ENST00000400593 CCDC180Q9P1Z9 1646 aa33.39■■■□□ 2.94
TPTEP1-202ENST00000400593 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
TPTEP1-202ENST00000400593 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
TPTEP1-202ENST00000400593 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
TPTEP1-202ENST00000400593 NACADO15069 1562 aa31.6■■■□□ 2.65
TPTEP1-202ENST00000400593 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
TPTEP1-202ENST00000400593 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
TPTEP1-202ENST00000400593 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
TPTEP1-202ENST00000400593 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
TPTEP1-202ENST00000400593 MYO15BQ96JP2 1530 aa31.23■■■□□ 2.59
TPTEP1-202ENST00000400593 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
TPTEP1-202ENST00000400593 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
TPTEP1-202ENST00000400593 CECR2Q9BXF3 1484 aa30.9■■■□□ 2.54
TPTEP1-202ENST00000400593 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
TPTEP1-202ENST00000400593 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
TPTEP1-202ENST00000400593 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
TPTEP1-202ENST00000400593 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
TPTEP1-202ENST00000400593 CUX2O14529 1486 aa29.84■■■□□ 2.37
TPTEP1-202ENST00000400593 ERCC6Q03468 1493 aa29.62■■■□□ 2.33
TPTEP1-202ENST00000400593 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
TPTEP1-202ENST00000400593 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.27
TPTEP1-202ENST00000400593 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
TPTEP1-202ENST00000400593 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
TPTEP1-202ENST00000400593 NESP48681 1621 aa29.12■■■□□ 2.25
TPTEP1-202ENST00000400593 THOC2Q8NI27 1593 aaKnown RBP29.02■■■□□ 2.24
TPTEP1-202ENST00000400593 MROH2BQ7Z745 1585 aa28.99■■■□□ 2.23
TPTEP1-202ENST00000400593 ATAD2BQ9ULI0 1458 aa28.96■■■□□ 2.23
TPTEP1-202ENST00000400593 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
TPTEP1-202ENST00000400593 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.22
TPTEP1-202ENST00000400593 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
TPTEP1-202ENST00000400593 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
TPTEP1-202ENST00000400593 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.19
TPTEP1-202ENST00000400593 WIZO95785 1651 aa28.73■■■□□ 2.19
TPTEP1-202ENST00000400593 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
TPTEP1-202ENST00000400593 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
TPTEP1-202ENST00000400593 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
TPTEP1-202ENST00000400593 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
TPTEP1-202ENST00000400593 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
TPTEP1-202ENST00000400593 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
TPTEP1-202ENST00000400593 WDR62O43379 1518 aa28.36■■■□□ 2.13
TPTEP1-202ENST00000400593 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
TPTEP1-202ENST00000400593 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
TPTEP1-202ENST00000400593 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
TPTEP1-202ENST00000400593 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
TPTEP1-202ENST00000400593 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
TPTEP1-202ENST00000400593 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
TPTEP1-202ENST00000400593 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
TPTEP1-202ENST00000400593 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
TPTEP1-202ENST00000400593 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
TPTEP1-202ENST00000400593 CFTRP13569 1480 aa27.88■■■□□ 2.05
TPTEP1-202ENST00000400593 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
TPTEP1-202ENST00000400593 URB2Q14146 1524 aaKnown RBP27.81■■■□□ 2.04
TPTEP1-202ENST00000400593 TRHP20396 242 aaPredicted RBP27.8■■■□□ 2.04
TPTEP1-202ENST00000400593 CYB5RLQ6IPT4 315 aa27.75■■■□□ 2.03
TPTEP1-202ENST00000400593 AEBP2Q6ZN18 517 aaPredicted RBP27.72■■■□□ 2.03
TPTEP1-202ENST00000400593 ZNF608Q9ULD9 1512 aaPredicted RBP27.64■■■□□ 2.02
TPTEP1-202ENST00000400593 ARAP1Q96P48 1450 aa27.56■■■□□ 2
TPTEP1-202ENST00000400593 IFT140Q96RY7 1462 aa27.55■■■□□ 2
TPTEP1-202ENST00000400593 CHD1O14646 1710 aa27.49■■□□□ 1.99
TPTEP1-202ENST00000400593 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
TPTEP1-202ENST00000400593 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
TPTEP1-202ENST00000400593 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
TPTEP1-202ENST00000400593 FBLN2P98095 1184 aa27.31■■□□□ 1.96
TPTEP1-202ENST00000400593 DNMBPQ6XZF7 1577 aa27.28■■□□□ 1.96
TPTEP1-202ENST00000400593 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.959e-7■■■■□ 20
TPTEP1-202ENST00000400593 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.956e-7■□□□□ 11.1
TPTEP1-202ENST00000400593 CUX1P39880 1505 aa27.19■■□□□ 1.94
TPTEP1-202ENST00000400593 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
TPTEP1-202ENST00000400593 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
TPTEP1-202ENST00000400593 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
TPTEP1-202ENST00000400593 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
TPTEP1-202ENST00000400593 CLASP1Q7Z460 1538 aa27.07■■□□□ 1.92
TPTEP1-202ENST00000400593 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
TPTEP1-202ENST00000400593 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
TPTEP1-202ENST00000400593 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
TPTEP1-202ENST00000400593 SNAPC4Q5SXM2 1469 aa26.97■■□□□ 1.91
TPTEP1-202ENST00000400593 TDRD9Q8NDG6 1382 aaKnown RBP26.93■■□□□ 1.9
TPTEP1-202ENST00000400593 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
TPTEP1-202ENST00000400593 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
TPTEP1-202ENST00000400593 SOGA1O94964 1423 aa26.89■■□□□ 1.9
TPTEP1-202ENST00000400593 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
TPTEP1-202ENST00000400593 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
TPTEP1-202ENST00000400593 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
TPTEP1-202ENST00000400593 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
TPTEP1-202ENST00000400593 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
TPTEP1-202ENST00000400593 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
TPTEP1-202ENST00000400593 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
TPTEP1-202ENST00000400593 PBRM1Q86U86 1689 aa26.64■■□□□ 1.85
TPTEP1-202ENST00000400593 ILDR1Q86SU0 546 aaPredicted RBP26.63■■□□□ 1.85
TPTEP1-202ENST00000400593 ERCC6L2Q5T890 1561 aa26.62■■□□□ 1.85
TPTEP1-202ENST00000400593 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
TPTEP1-202ENST00000400593 KIF13AQ9H1H9 1805 aa26.62■■□□□ 1.85
TPTEP1-202ENST00000400593 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
TPTEP1-202ENST00000400593 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
TPTEP1-202ENST00000400593 FAM9AQ8IZU1 332 aaPredicted RBP26.52■■□□□ 1.84
TPTEP1-202ENST00000400593 EEA1Q15075 1411 aa26.47■■□□□ 1.83
TPTEP1-202ENST00000400593 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
TPTEP1-202ENST00000400593 CUL7Q14999 1698 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms