RNA–Protein interactions for RNA: ENST00000575636.5

PAM16-210, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-210ENST00000575636 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.53
PAM16-210ENST00000575636 CCDC180Q9P1Z9 1646 aa38.55■■■■□ 3.76
PAM16-210ENST00000575636 ABCC9O60706 1549 aa37.66■■■■□ 3.62
PAM16-210ENST00000575636 RB1CC1Q8TDY2 1594 aa36.25■■■■□ 3.39
PAM16-210ENST00000575636 NACADO15069 1562 aa36.21■■■■□ 3.39
PAM16-210ENST00000575636 DCAF8L2P0C7V8 631 aa36.14■■■■□ 3.38
PAM16-210ENST00000575636 ZCCHC6Q5VYS8 1495 aaKnown RBP36.09■■■■□ 3.37
PAM16-210ENST00000575636 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
PAM16-210ENST00000575636 DCAF1Q9Y4B6 1507 aa35.85■■■■□ 3.33
PAM16-210ENST00000575636 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
PAM16-210ENST00000575636 BICRAQ9NZM4 1560 aa35.19■■■■□ 3.22
PAM16-210ENST00000575636 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
PAM16-210ENST00000575636 SCRIBQ14160 1630 aa35.15■■■■□ 3.22
PAM16-210ENST00000575636 SHROOM4Q9ULL8 1493 aa34.77■■■■□ 3.16
PAM16-210ENST00000575636 DNAJC5BQ9UF47 199 aa34.58■■■■□ 3.13
PAM16-210ENST00000575636 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
PAM16-210ENST00000575636 CC2D2AQ9P2K1 1620 aa34.11■■■■□ 3.05
PAM16-210ENST00000575636 CECR2Q9BXF3 1484 aa33.84■■■■□ 3.01
PAM16-210ENST00000575636 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
PAM16-210ENST00000575636 BAZ1AQ9NRL2 1556 aaPredicted RBP33.57■■■□□ 2.96
PAM16-210ENST00000575636 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
PAM16-210ENST00000575636 NCAPD3P42695 1498 aa33.4■■■□□ 2.94
PAM16-210ENST00000575636 MROH2BQ7Z745 1585 aa33.39■■■□□ 2.94
PAM16-210ENST00000575636 SMARCA2P51531 1590 aa33.38■■■□□ 2.93
PAM16-210ENST00000575636 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
PAM16-210ENST00000575636 HMGXB3Q12766 1538 aa33.25■■■□□ 2.91
PAM16-210ENST00000575636 BAZ1BQ9UIG0 1483 aaKnown RBP33.14■■■□□ 2.9
PAM16-210ENST00000575636 WIZO95785 1651 aa33.07■■■□□ 2.88
PAM16-210ENST00000575636 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
PAM16-210ENST00000575636 TOP2AP11388 1531 aaKnown RBP32.68■■■□□ 2.82
PAM16-210ENST00000575636 NESP48681 1621 aa32.62■■■□□ 2.81
PAM16-210ENST00000575636 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
PAM16-210ENST00000575636 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
PAM16-210ENST00000575636 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
PAM16-210ENST00000575636 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
PAM16-210ENST00000575636 KIF21AQ7Z4S6 1674 aa32.28■■■□□ 2.76
PAM16-210ENST00000575636 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
PAM16-210ENST00000575636 CFTRP13569 1480 aa32.24■■■□□ 2.75
PAM16-210ENST00000575636 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
PAM16-210ENST00000575636 SUPT5HO00267 1087 aaKnown RBP32.13■■■□□ 2.73
PAM16-210ENST00000575636 CUX2O14529 1486 aa32.11■■■□□ 2.73
PAM16-210ENST00000575636 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
PAM16-210ENST00000575636 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
PAM16-210ENST00000575636 CEP164Q9UPV0 1460 aa32.01■■■□□ 2.71
PAM16-210ENST00000575636 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
PAM16-210ENST00000575636 WDR62O43379 1518 aa31.88■■■□□ 2.69
PAM16-210ENST00000575636 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
PAM16-210ENST00000575636 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
PAM16-210ENST00000575636 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
PAM16-210ENST00000575636 DNMBPQ6XZF7 1577 aa31.52■■■□□ 2.64
PAM16-210ENST00000575636 CUX1P39880 1505 aa31.34■■■□□ 2.61
PAM16-210ENST00000575636 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
PAM16-210ENST00000575636 POLA1P09884 1462 aaPredicted RBP31.28■■■□□ 2.6
PAM16-210ENST00000575636 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
PAM16-210ENST00000575636 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
PAM16-210ENST00000575636 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
PAM16-210ENST00000575636 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
PAM16-210ENST00000575636 SOGA1O94964 1423 aa31.14■■■□□ 2.58
PAM16-210ENST00000575636 DNAJC5Q9H3Z4 198 aa31.12■■■□□ 2.57
PAM16-210ENST00000575636 EIF4G3O43432 1585 aaKnown RBP31.11■■■□□ 2.57
PAM16-210ENST00000575636 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
PAM16-210ENST00000575636 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
PAM16-210ENST00000575636 TOP2BQ02880 1626 aa31.07■■■□□ 2.56
PAM16-210ENST00000575636 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
PAM16-210ENST00000575636 AQRO60306 1485 aaKnown RBP eCLIP31.03■■■□□ 2.562e-8■■■■■ 38.1
PAM16-210ENST00000575636 WDR97A6NE52 1622 aa31.01■■■□□ 2.55
PAM16-210ENST00000575636 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
PAM16-210ENST00000575636 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
PAM16-210ENST00000575636 ABCA5Q8WWZ7 1642 aa30.81■■■□□ 2.52
PAM16-210ENST00000575636 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
PAM16-210ENST00000575636 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
PAM16-210ENST00000575636 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
PAM16-210ENST00000575636 OSCARQ8IYS5 282 aa30.77■■■□□ 2.52
PAM16-210ENST00000575636 CHD1O14646 1710 aa30.75■■■□□ 2.51
PAM16-210ENST00000575636 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
PAM16-210ENST00000575636 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
PAM16-210ENST00000575636 FBLN2P98095 1184 aa30.62■■■□□ 2.49
PAM16-210ENST00000575636 SYNJ2O15056 1496 aa30.58■■■□□ 2.49
PAM16-210ENST00000575636 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
PAM16-210ENST00000575636 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
PAM16-210ENST00000575636 ADAMTS12P58397 1594 aa30.5■■■□□ 2.47
PAM16-210ENST00000575636 KIF27Q86VH2 1401 aa30.44■■■□□ 2.46
PAM16-210ENST00000575636 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
PAM16-210ENST00000575636 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
PAM16-210ENST00000575636 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
PAM16-210ENST00000575636 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
PAM16-210ENST00000575636 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
PAM16-210ENST00000575636 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
PAM16-210ENST00000575636 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
PAM16-210ENST00000575636 IGF1RP08069 1367 aa30.33■■■□□ 2.45
PAM16-210ENST00000575636 ARHGEF11O15085 1522 aa30.3■■■□□ 2.44
PAM16-210ENST00000575636 CUL7Q14999 1698 aa30.28■■■□□ 2.44
PAM16-210ENST00000575636 NUP160Q12769 1436 aa30.26■■■□□ 2.43
PAM16-210ENST00000575636 CEP170Q5SW79 1584 aa30.26■■■□□ 2.43
PAM16-210ENST00000575636 RUSC2Q8N2Y8 1516 aa30.22■■■□□ 2.43
PAM16-210ENST00000575636 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
PAM16-210ENST00000575636 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
PAM16-210ENST00000575636 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
PAM16-210ENST00000575636 CHIC1Q5VXU3 224 aa30.01■■■□□ 2.39
PAM16-210ENST00000575636 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms