RNA–Protein interactions for RNA: ENST00000393293.4

ABL1-203, Transcript of ABL proto-oncogene 1, non-receptor tyrosine kinase, humanhuman

TSL 5

Gene ABL1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABL1-203ENST00000393293 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
ABL1-203ENST00000393293 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
ABL1-203ENST00000393293 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
ABL1-203ENST00000393293 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
ABL1-203ENST00000393293 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
ABL1-203ENST00000393293 FOXD1Q16676 465 aa22■■□□□ 1.11
ABL1-203ENST00000393293 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
ABL1-203ENST00000393293 ADRA2BP18089 450 aa21.16■□□□□ 0.98
ABL1-203ENST00000393293 PIAS4Q8N2W9 510 aaPredicted RBP20.68■□□□□ 0.9
ABL1-203ENST00000393293 MSH5O43196 834 aa20.19■□□□□ 0.82
ABL1-203ENST00000393293 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
ABL1-203ENST00000393293 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
ABL1-203ENST00000393293 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
ABL1-203ENST00000393293 KCNA4P22459 653 aa19.09■□□□□ 0.65
ABL1-203ENST00000393293 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
ABL1-203ENST00000393293 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
ABL1-203ENST00000393293 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
ABL1-203ENST00000393293 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
ABL1-203ENST00000393293 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
ABL1-203ENST00000393293 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
ABL1-203ENST00000393293 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
ABL1-203ENST00000393293 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
ABL1-203ENST00000393293 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
ABL1-203ENST00000393293 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
ABL1-203ENST00000393293 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
ABL1-203ENST00000393293 ZBTB22O15209 634 aa17.62■□□□□ 0.41
ABL1-203ENST00000393293 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
ABL1-203ENST00000393293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
ABL1-203ENST00000393293 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
ABL1-203ENST00000393293 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
ABL1-203ENST00000393293 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
ABL1-203ENST00000393293 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
ABL1-203ENST00000393293 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
ABL1-203ENST00000393293 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
ABL1-203ENST00000393293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
ABL1-203ENST00000393293 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
ABL1-203ENST00000393293 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
ABL1-203ENST00000393293 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
ABL1-203ENST00000393293 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
ABL1-203ENST00000393293 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
ABL1-203ENST00000393293 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
ABL1-203ENST00000393293 APLP2Q06481 763 aa16.83■□□□□ 0.28
ABL1-203ENST00000393293 CAPN15O75808 1086 aa16.74■□□□□ 0.27
ABL1-203ENST00000393293 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
ABL1-203ENST00000393293 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
ABL1-203ENST00000393293 DSG3P32926 999 aa16.54■□□□□ 0.24
ABL1-203ENST00000393293 ABCB7O75027 752 aa16.46■□□□□ 0.23
ABL1-203ENST00000393293 POLA2Q14181 598 aa16.44■□□□□ 0.22
ABL1-203ENST00000393293 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
ABL1-203ENST00000393293 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
ABL1-203ENST00000393293 FBLN2P98095 1184 aa16.03■□□□□ 0.16
ABL1-203ENST00000393293 OSCARQ8IYS5 282 aa15.89■□□□□ 0.13
ABL1-203ENST00000393293 FKBP8Q14318 412 aa15.73■□□□□ 0.11
ABL1-203ENST00000393293 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
ABL1-203ENST00000393293 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
ABL1-203ENST00000393293 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
ABL1-203ENST00000393293 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
ABL1-203ENST00000393293 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
ABL1-203ENST00000393293 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
ABL1-203ENST00000393293 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
ABL1-203ENST00000393293 PROM2Q8N271 834 aa15.54■□□□□ 0.08
ABL1-203ENST00000393293 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
ABL1-203ENST00000393293 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
ABL1-203ENST00000393293 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
ABL1-203ENST00000393293 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
ABL1-203ENST00000393293 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
ABL1-203ENST00000393293 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
ABL1-203ENST00000393293 CLEC11AQ9Y240 323 aa15.14■□□□□ 0.01
ABL1-203ENST00000393293 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
ABL1-203ENST00000393293 CHRDL2Q6WN34 429 aa15.06■□□□□ 0
ABL1-203ENST00000393293 PRR29P0C7W0 189 aa15.02■□□□□ -0
ABL1-203ENST00000393293 VASPP50552 380 aaPredicted RBP14.97□□□□□ -0.01
ABL1-203ENST00000393293 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
ABL1-203ENST00000393293 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
ABL1-203ENST00000393293 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
ABL1-203ENST00000393293 MIER1Q8N108 512 aa14.87□□□□□ -0.03
ABL1-203ENST00000393293 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
ABL1-203ENST00000393293 IFNLR1Q8IU57 520 aaPredicted RBP14.82□□□□□ -0.04
ABL1-203ENST00000393293 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
ABL1-203ENST00000393293 PRKAR2AP13861 404 aaKnown RBP14.81□□□□□ -0.04
ABL1-203ENST00000393293 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
ABL1-203ENST00000393293 PLEKHG5O94827 1062 aa14.7□□□□□ -0.06
ABL1-203ENST00000393293 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
ABL1-203ENST00000393293 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
ABL1-203ENST00000393293 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
ABL1-203ENST00000393293 POTEHQ6S545 545 aa14.58□□□□□ -0.08
ABL1-203ENST00000393293 NUBP1P53384 320 aa14.57□□□□□ -0.08
ABL1-203ENST00000393293 SPOCK2Q92563 424 aa14.57□□□□□ -0.08
ABL1-203ENST00000393293 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
ABL1-203ENST00000393293 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
ABL1-203ENST00000393293 C19orf67A6NJJ6 358 aa14.44□□□□□ -0.1
ABL1-203ENST00000393293 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
ABL1-203ENST00000393293 EVX2Q03828 476 aa14.36□□□□□ -0.11
ABL1-203ENST00000393293 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
ABL1-203ENST00000393293 HAX1O00165 279 aa14.35□□□□□ -0.11
ABL1-203ENST00000393293 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
ABL1-203ENST00000393293 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
ABL1-203ENST00000393293 PKD2Q13563 968 aa14.34□□□□□ -0.11
ABL1-203ENST00000393293 DCAF8Q5TAQ9 597 aa14.34□□□□□ -0.11
ABL1-203ENST00000393293 GSE1Q14687 1217 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms