Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.85□□□□□ -0.19
NKX6-2Q9C056 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 AL138781.1-201ENST00000566567 1274 ntBASIC13.85□□□□□ -0.19
NKX6-2Q9C056 AC026271.3-201ENST00000571884 352 ntBASIC13.85□□□□□ -0.19
NKX6-2Q9C056 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 OR2I1P-210ENST00000642037 4691 ntBASIC13.85□□□□□ -0.19
NKX6-2Q9C056 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX6-2Q9C056 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 AL023284.2-201ENST00000405850 579 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 CROCCP5-201ENST00000436658 830 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 KSR1P1-201ENST00000446298 240 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 TSPY6P-201ENST00000448518 926 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 AC083880.1-201ENST00000608266 535 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 LINC01451-201ENST00000623792 534 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 AC046185.3-201ENST00000623228 1824 ntBASIC13.84□□□□□ -0.19
NKX6-2Q9C056 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX6-2Q9C056 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.83□□□□□ -0.19
NKX6-2Q9C056 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.83□□□□□ -0.19
NKX6-2Q9C056 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX6-2Q9C056 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX6-2Q9C056 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX6-2Q9C056 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms