Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CRLF3Q8IUI8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CRLF3Q8IUI8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 AL513523.2-202ENST00000427283 2040 ntBASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRLF3Q8IUI8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 MIR662-201ENST00000384847 95 ntBASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRLF3Q8IUI8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 MYCLP1-201ENST00000372451 1075 ntBASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CRLF3Q8IUI8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms